Pairwise Alignments

Query, 309 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 297 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  169 bits (429), Expect = 6e-47
 Identities = 104/306 (33%), Positives = 170/306 (55%), Gaps = 16/306 (5%)

Query: 5   LETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWFPLWFGFQ 64
           L+ L  GL+VG LY ++A+ FVLIYK++ V NFAQG  +L  A         +  W+   
Sbjct: 7   LQLLVNGLIVGTLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGA---------WTCWWLVT 57

Query: 65  SQILANILAFVAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGIGQTLFG 124
           S  L   +AF      M+V    ++ + L  L+ +  I+++M T+G++ F   + +++FG
Sbjct: 58  SMALPFYVAFPMTFLFMMVFGIALQMIVLRPLIGEPVISVIMVTIGLSIFFQAVMKSIFG 117

Query: 125 NDIYKIDVGMPKEPLMVLEGTFQGGLLLSQEDLIAALVAAGLVVVLAIFFQKTATGRALR 184
                     P + + +L  + Q   L+S   L+ ++V  GL    A FF+ +  G A+R
Sbjct: 118 VWAQPFPEIFPVKSVDILGLSVQPAYLMS---LVVSIVIMGL---FAWFFKYSRMGLAMR 171

Query: 185 AVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGVQFSLSLVALKALPVVI 244
           A A + Q AQS+GI +K ++   W+++   + +AG++ G   GV  +LS   +K  P VI
Sbjct: 172 ATAFNQQVAQSLGISVKAVFATAWAISAMVSALAGVVVGMVNGVSSALSFFGIKVFPAVI 231

Query: 245 LGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLG-GGIEIWFAYVLALVFLLVRPQGLFGE 303
           +GGL SI GA++GGL+IGV E L+E   G  L  G +     + + ++ L+++P GLFG 
Sbjct: 232 VGGLDSIIGAVLGGLIIGVLENLAEYADGQYLHLGNLYTVAPFYVLVIILMIKPYGLFGT 291

Query: 304 KIIDRV 309
           K I+RV
Sbjct: 292 KTIERV 297