Pairwise Alignments

Query, 354 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  128 bits (322), Expect = 2e-34
 Identities = 103/352 (29%), Positives = 157/352 (44%), Gaps = 45/352 (12%)

Query: 14  RADQQIFPIAQDRIAILV----LLLVAFVVVPLGVSDYWMRA---ILTPFLILSLAALGL 66
           R+D+++ P A      L      +++  +VV L    +  R    I T  LI  L  LGL
Sbjct: 71  RSDRKLIPPAVSNYLTLPKTQRYVIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGL 130

Query: 67  NILVGYCGQISLGTGAFMAVGAYAAYNFQVRIDGMPLIASLLLGGLCSTVIGVLFGIPSL 126
           NI+VG  G + LG   F AVGAY+ Y       G      L + GL +   G L G P L
Sbjct: 131 NIVVGLAGLLDLGYVGFYAVGAYS-YAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVL 189

Query: 127 RIKGLYLAVATLAAQFFTDWAFLRIQWFTNNSSSGSVSVAGLNVFGVPIE---------- 176
           R++G YLA+ TL         FLR         +G  ++     FG+  E          
Sbjct: 190 RLRGDYLAIVTLGFGEIIR-LFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTF 248

Query: 177 --------SPVQKYLFCLAFVVVFALLA----KNLVRSAIGREWMAMRDMDVAAAVIGIR 224
                   + + K +F     ++ ALLA      L+R  IGR W A+R+ ++A   +G+ 
Sbjct: 249 HEFFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLN 308

Query: 225 PVYAKLTAFAVSSFIVGVAGALWGFVHLGAWEPAAFSIDRSFQLLFMVIIGGLGSIMGSF 284
           P   KL+AF + +   G AG+ +     G   P +F+   S  +L +V++GG+GS +G  
Sbjct: 309 PTVIKLSAFTLGACFAGFAGSFFA-ARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVI 367

Query: 285 FGAAFIVLLPLFLNQLPAWLGFSISTALASHLETMIFGALIVFFLIVEPHGL 336
             A  ++LLP  + +              S    ++FGAL+V  +I  P GL
Sbjct: 368 LAAIVMILLPELMREF-------------SEYRMLMFGALMVLMMIWRPQGL 406