Pairwise Alignments

Query, 704 a.a., Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) from Variovorax sp. SCN45

Subject, 380 a.a., conserved lipoprotein of unknown function from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 8e-12
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 20/173 (11%)

Query: 153 AIHEGKVYVAAFDGRLIALDAATGQKVWEKDTLEGQKGSYTITGAPRVFKGKVIIGNGGA 212
           AI   ++Y +  +G + ALD  TG  VW+KD LE Q     ++GA  V  G V++G    
Sbjct: 63  AIENDRIYASDVNGEVFALDRITGDVVWKKD-LELQ-----VSGAVGVGYGLVMLGT--- 113

Query: 213 EYGVRGFVTAYDAKTGEQKWRWFVVPGDPSKPFEDASMAKAAKTWDPSGKYWEAGGGGTA 272
              ++G V A D+ TGE++WR  V     + P  +  +    +T D      +A  G   
Sbjct: 114 ---LKGEVIALDSSTGEERWRSRVTSEVLAPPANNGDVV-VVQTQDDRLIGLDAATGDRR 169

Query: 273 WDSFAFDPELNLMYVGTGNGSPWSHKARSPKGGDNLYLGSVVALDPDTGKYKW 325
           W        L L     G G+P +    +  G   L  G VVA+D + G   W
Sbjct: 170 WIYENSPAVLTL----RGTGAPIATNRLAVAG---LSTGKVVAVDINNGVPVW 215



 Score = 41.2 bits (95), Expect = 9e-08
 Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 87  WSYD----LESTRGVEATPLVVDGIMYVTASWSVVHAIDTRTGQKLWTFDPQVDRSKGFK 142
           W Y+    + + RG  A P+  + +     S   V A+D   G  +W     + + +   
Sbjct: 170 WIYENSPAVLTLRGTGA-PIATNRLAVAGLSTGKVVAVDINNGVPVWESRVAIPKGRSEL 228

Query: 143 GCCDVVNRGVAIHEGKVYVAAFDGRLIALDAATGQKVWEKD 183
                ++ G+ +  G +YV+ + GR+  LD  +G+++W++D
Sbjct: 229 DRVVDIDGGLLLSGGTLYVSTYQGRVAGLDLESGRELWQRD 269



 Score = 38.9 bits (89), Expect = 5e-07
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 90  DLESTRGVEATPLVVDGIMYVTASWSVVHAIDTRTGQKLWTFDPQVDRSKGFKGCCDVVN 149
           +L+    ++   L+  G +YV+     V  +D  +G++LW    Q D S           
Sbjct: 227 ELDRVVDIDGGLLLSGGTLYVSTYQGRVAGLDLESGRELW----QRDASSYV-------- 274

Query: 150 RGVAIHEGKVYVAAFDGRLIALDAATGQKVWEKDTLEGQKGSYTITGAPRVFKGKVIIGN 209
            GVA   G VYV+   G + ++D  +   +W  D++  ++       AP VF   V +G+
Sbjct: 275 -GVAQGFGNVYVSEASGTVESVDERSSSALWSNDSMARRQ-----LTAPEVFSSYVAVGD 328



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 23/132 (17%)

Query: 101 PLVVDGIMYVTASWSVVHAIDTRTGQKLWTFDPQVDRSKGFKGCCDVVNRGVAIHEGKVY 160
           P + +  +Y +     V A+D  TG  +W  D ++            V+  V +  G V 
Sbjct: 62  PAIENDRIYASDVNGEVFALDRITGDVVWKKDLELQ-----------VSGAVGVGYGLVM 110

Query: 161 VAAFDGRLIALDAATGQKVWEKDTLEGQKGSYTITGAPRVFKGKVIIGNGGAEYGVRGFV 220
           +    G +IALD++TG++ W            +   AP    G V++     +      +
Sbjct: 111 LGTLKGEVIALDSSTGEERWRSRVT-------SEVLAPPANNGDVVVVQTQDDR-----L 158

Query: 221 TAYDAKTGEQKW 232
              DA TG+++W
Sbjct: 159 IGLDAATGDRRW 170



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 16/73 (21%)

Query: 501 VDYVSPWNGGTLTTAGNLVFQGTADGRLLAYDARTGEKLWETPTGTGVVAAPSTYMVDGK 560
           +D V   +GG L + G L +  T  GR+   D  +G +LW+                D  
Sbjct: 228 LDRVVDIDGGLLLSGGTL-YVSTYQGRVAGLDLESGRELWQR---------------DAS 271

Query: 561 QYVSVAVGWGGVY 573
            YV VA G+G VY
Sbjct: 272 SYVGVAQGFGNVY 284



 Score = 34.7 bits (78), Expect = 9e-06
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 485 GRLVAWDPVAQKEAWGVDYVSPWNGGTLTTAGNLVFQGTADGRLLAYDARTGEKLWETPT 544
           G + A D +     W  D     +G      G LV  GT  G ++A D+ TGE+ W +  
Sbjct: 76  GEVFALDRITGDVVWKKDLELQVSGAVGVGYG-LVMLGTLKGEVIALDSSTGEERWRSRV 134

Query: 545 GTGVVAAPS 553
            + V+A P+
Sbjct: 135 TSEVLAPPA 143



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 16/119 (13%)

Query: 449 DKDWKFNEDVPGRPHAGLGWNLAKFANVEPPKSKPFGRLVAWDPVAQKEAWGVDYVSPWN 508
           D  WK + ++      G+G+ L     ++       G ++A D    +E W     S   
Sbjct: 87  DVVWKKDLELQVSGAVGVGYGLVMLGTLK-------GEVIALDSSTGEERWRSRVTSEVL 139

Query: 509 GGTLTTAGNLVFQGTADGRLLAYDARTGEKLW--------ETPTGTGVVAAPSTYMVDG 559
                  G++V   T D RL+  DA TG++ W         T  GTG   A +   V G
Sbjct: 140 APPANN-GDVVVVQTQDDRLIGLDAATGDRRWIYENSPAVLTLRGTGAPIATNRLAVAG 197



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)

Query: 311 GSVVALDPDTGKYKWHYQET------PGDNWDYTSTQS 342
           G V+ALD  TG+ +W  + T      P +N D    Q+
Sbjct: 116 GEVIALDSSTGEERWRSRVTSEVLAPPANNGDVVVVQT 153