Pairwise Alignments

Query, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

Subject, 397 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 28/287 (9%)

Query: 6   DQQLVKRMNRSVLLRLLRAQPGLSRARLAGESGLTKSTVSLLVRELIDE-------DWLS 58
           + Q ++  N+ V+L LL  Q   +++ LA  + ++   VS +++EL  E       D   
Sbjct: 6   NNQQIRHNNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQ 65

Query: 59  ESGAAVADGLGRPSTPLRINVGVRALMGVEIAVETVRLVCMSLQGEVLYSDTQALADSAP 118
             G +    L  P     + + V     +E  V      C+S +GE  Y    A    A 
Sbjct: 66  TRGHSSGTWLIAPEGDWTLCLNVTPT-SIECQVANA---CLSPKGEFEYLQIDAPTPQA- 120

Query: 119 AGACAQVARMASVAQARLEQLGLRLSSIGVCVPGAVDDCTGVVRFAPNLGWRN-VSLLPA 177
                 ++ +        +    R  ++ + + G VD  TGV +  P   W   V +   
Sbjct: 121 -----LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYL 175

Query: 178 LEKAFGAVGLPRVTVQLQNDADAAVLGEYEFAASVGQEGEDPLIFVNCDVGVGAGVVLND 237
           LE+  G        +++  D D  +L   E   +  QE +     +N D G+G+  V+N+
Sbjct: 176 LEEKLG--------IRVMVDNDCVMLALAEKWQNNSQERD--FCVINVDYGIGSSFVINE 225

Query: 238 RLFTGAQGMAGEIGHTILELDGPECSCGRRGCAEAFFGSRVLRREGR 284
           +++ G+   +G+IGHTI+  DG  C CGR GC E       L+++ R
Sbjct: 226 QIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQAR 272