Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 404 a.a., L-arabinose ABC transporter, permease protein AraH from Variovorax sp. SCN45

 Score =  231 bits (588), Expect = 4e-65
 Identities = 140/385 (36%), Positives = 210/385 (54%), Gaps = 17/385 (4%)

Query: 15  DLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARHIDL 74
           +LR   M + L  + V F V++ G  L P NL N+  Q + V I++  M+L+IVA HIDL
Sbjct: 30  NLREYGMLISLVAIMVLFQVLTDGTLLRPLNLTNLLLQNSYVVIMALGMLLVIVAGHIDL 89

Query: 75  SVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSFVVTLGG 134
           SVGSV GF+G L A L     W +    +  +    ++   QGW  A   +PSF+VTL G
Sbjct: 90  SVGSVCGFIGALAAVLMVEYDWHFVPTAIVSILAGAVIGAAQGWFVAFRKIPSFIVTLAG 149

Query: 135 LMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYD----GGIGVTASWVIAGLVAAVLFARMF 190
           ++ F+G    +  G++       FQRL  G+     GG  +  + +  G +AAV  A +F
Sbjct: 150 MLVFKGLTLALLAGQSVGPFPVEFQRLSSGFIPDPLGGDTLRITSLAVGALAAV--ALVF 207

Query: 191 QKRAARAR---HEMPNEPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPVLI 247
            K   RAR   H M  EP    L+     AA+++ F+ +++ YK        G+P  +++
Sbjct: 208 FKLRGRARLAAHGMETEPYAFFLVKNLFFAAIILFFSYLLSTYK--------GLPNVLVV 259

Query: 248 WAVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVS 307
            AV+ +V  F+ +RT  GR ++A+GGN  AA L G+  +R+  + F  +  L  +A +V 
Sbjct: 260 MAVLIVVYDFVTNRTTIGRRIYALGGNEKAARLSGVKTQRLAFLTFVNMGALAALAGLVF 319

Query: 308 IARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVP 367
            ARLN  T   G G EL VIAA  IGG + +GG G + G+V+GA IM  +++GM +L + 
Sbjct: 320 AARLNTATPKAGLGFELDVIAACFIGGASASGGVGRVMGAVIGAFIMGVMNNGMSILGIG 379

Query: 368 IGKRMVIIGQVLIVAVVFDVLYRRK 392
           I  + VI G VL+ AV  DV  + K
Sbjct: 380 IDYQQVIKGLVLLAAVFIDVYNKNK 404