Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 9e-30
 Identities = 106/382 (27%), Positives = 164/382 (42%), Gaps = 75/382 (19%)

Query: 13  GIDLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARHI 72
           G+   L L   LLA M V FS +S   F S      +A Q   + +++  M  +++   I
Sbjct: 22  GLGTYLGLAGALLA-MIVLFSFLSSH-FWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGI 79

Query: 73  DLSVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSFVVTL 132
           DLSVGSV+      ++                   VA+L     GW   VL  PS     
Sbjct: 80  DLSVGSVLALAASTVS-------------------VAIL-----GWGWGVL--PS----- 108

Query: 133 GGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGLVAAVLFARMFQK 192
             L+    AA                  L G   GG  VT +W I   + ++    M + 
Sbjct: 109 -ALLGMAVAA------------------LAGSITGG--VTVAWRIPSFIVSLGVLEMARG 147

Query: 193 RAARARHEMPNEPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPVLIWAVVA 252
            A +                           A + + Y   S     G+    +I  +V 
Sbjct: 148 LAYQFTDSRT---------------------AYIGDAYAWFSNPVAFGVSPAFIIALLVI 186

Query: 253 IVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVSIARLN 312
           ++   ++ RT FGRY+  +G N +A  L GI  +   +++FAL+ +L  +AA+  I+RL 
Sbjct: 187 VLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLE 246

Query: 313 AGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVPIGKRM 372
           A   + G+G+EL VIAA VIGGT+L GG GS+  +  G LI+  L +G+  +      + 
Sbjct: 247 AADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKR 306

Query: 373 VIIGQVLIVAVVFDVLYRRKFG 394
           +I G V+++AVV D    R+ G
Sbjct: 307 IITGAVIVIAVVLDTYRSRRAG 328