Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 308 a.a., rhizopine-binding protein from Pseudomonas simiae WCS417

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 20/270 (7%)

Query: 25  VGVSWSNFQEERWKTDEAAIKAELEKLGAKYISADAGGSPEKQLGDIEGLMSKGAKALIV 84
           +GVS +   +         ++A   +   +    DA G   +QL  +EG +++   A+IV
Sbjct: 25  IGVSIARVDDNFMTYVRTGLEAAARQQDVQIQFEDAQGDVVRQLNQVEGFLNQKVDAVIV 84

Query: 85  LAMDKDAILPAVTKATRQKVPVVAYDRLIE----APGVFYITFDNVEVGRMEAREVL-KV 139
           L +D  A       A   K P+V  +R  +      GV  +  +++E G+++ R +  K+
Sbjct: 85  LPVDTAATANMTRAAVAAKTPLVYVNRHPDERTLPKGVVTVASNDIEAGQLQMRYLAEKL 144

Query: 140 KPKGNYVIIKGSPSDPNADFLRAGQQEVLDASIKKGDIKIVGDEYTEGWKPEVAQKNMEQ 199
             KGN  II G  +         G ++VL        IK+V ++ +  W     Q++   
Sbjct: 145 AGKGNVAIIMGDLAQNATHDRTEGAKQVLK---DFPGIKVV-EQQSADW-----QRSKGM 195

Query: 200 ILTKN----GNKVDAVVAANDGTAGGAVAAL--TAKGLRGIPVSGQDADFAALNRIALGT 253
            LT N    G + DA+VA ND  A GA  AL    K    + + G D     L  I  G 
Sbjct: 196 DLTSNWLLAGTQFDAIVANNDEMAIGAAMALQQAGKAKGDVAIVGIDGLPDGLAAIKRGL 255

Query: 254 QTATIFKDSRELGREAAIAAIALSQGKPVD 283
            TA++F+D +    +A  AA+ + +G+ ++
Sbjct: 256 LTASVFQDPKAQATQAVQAAVRMIKGEAIE 285