Pairwise Alignments

Query, 345 a.a., no description from Variovorax sp. SCN45

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 94/345 (27%), Positives = 135/345 (39%), Gaps = 21/345 (6%)

Query: 5   STRRSLLLAAASLPLAASAPAFAAVGGRVVIATWGGDYGDLLGKNVEQPLLKPRGIEAVQ 64
           S R + +L+A+ L LA  A   A     +   +WGG   D   +    P  K   I+ VQ
Sbjct: 4   SKRVTAVLSASLLTLACQA---ALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQ 60

Query: 65  STDDGPPRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLTDANVPNARNAIAAL 124
              DGP    KL A   S     DVV +    A   A  GL E L D N           
Sbjct: 61  ---DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPL-DFNQIKRDKIDPRF 116

Query: 125 RQPQAVPHVYSGLVIAYNPDKI-RTPPKSFNDLWDPK-YKGRVGLAEILFPYNIAAASLA 182
                V   +   V+ YN  K+    P  +  L+D K Y G+  L +   P  +  A LA
Sbjct: 117 VSDHGVGSFFFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLA 176

Query: 183 AGGTLSDLAP-----GMKKLGEMKALSPKIFATNEAVAQALKSEDIWITLAWRARVYQWR 237
            G     L P       KKL  +K      +       Q L S +  +   W  RVY  +
Sbjct: 177 DGVAPDKLYPLDLDRAFKKLDTIKQ-DIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQ 235

Query: 238 RAGVSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFAYLDAMLDARAQAAFAERMGYVPTV 297
           + G  V  +     +M      V+PK ++ K+ A  +L     A  QA FA +  Y P  
Sbjct: 236 QDGAPVGVSWKQNLVMADFL--VIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVN 293

Query: 298 TN--ARLPAELAAQIAFTPEEQSRFKVPDFGYFAQAMPALQQYWS 340
            +  A+L  +LA  +  T   Q +  + DF Y+A+   A+   W+
Sbjct: 294 VDSVAKLDKDLAPNLP-TAYAQDQVTL-DFAYWAKNGQAIAARWN 336