Pairwise Alignments

Query, 345 a.a., no description from Variovorax sp. SCN45

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 85/367 (23%), Positives = 145/367 (39%), Gaps = 47/367 (12%)

Query: 8   RSLLLAAASLPLAASAPAFAAVGGRVVIATWGGDYGDLLGKNVEQPLLKPRGIEAVQST- 66
           ++L+ AA +L  A +  A   V     +  W     D +G           GI+ V    
Sbjct: 5   QALIPAAFTLLFATTTQAAPTVS----VYNWT----DYIGDTTLADFQASSGIKVVYDVF 56

Query: 67  DDGPPRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLTDANVPNARNAIAALRQ 126
           D     + KLLA R       DVV   +   +  AQ G F  L  + +PN ++    L +
Sbjct: 57  DSNETLEGKLLAGRTG----YDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLK 112

Query: 127 P---------QAVPHVYSGLVIAYNPDKIRTPP-----KSFNDLWDP---KYKGRVGLAE 169
                      AVP+++    I YN DK++         S+  L++P   K   + G+A 
Sbjct: 113 QLEQNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAF 172

Query: 170 ILFPYNIAAASLA-AGGTLSDLAPGMKKLGEMKALSPKIFAT---NEAVAQALKSEDIWI 225
           +  P  +  A L   G       PG     E + L  + + T   +      L + D+ I
Sbjct: 173 MDSPDELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCI 232

Query: 226 TLAWRARVYQWR------RAGVSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFAYLDAML 279
              +   V+Q        + GV VA ++P EG         +PK++   + A A+++ +L
Sbjct: 233 AFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLL 292

Query: 280 DARAQAAFAERMGYVPTVTNARLPAELAAQIAFTPEEQSRFKVPDFGYFA-----QAMPA 334
           D +  A  +  +GY     +A+  A + A +   PE     +V D  Y +     + M  
Sbjct: 293 DPKVIAKVSATVGYANANPDAK--AYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRV 350

Query: 335 LQQYWSR 341
           + + WS+
Sbjct: 351 MTRSWSK 357