Pairwise Alignments

Query, 358 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  260 bits (665), Expect = 3e-74
 Identities = 142/311 (45%), Positives = 197/311 (63%), Gaps = 8/311 (2%)

Query: 2   SYLRLDNLQCTYDRTVAVRNLNLDVAQGELLALLGPSGCGKSTTLRMVAGFVQPSAGRIF 61
           +++ L N+   +     + N+NL + QG+++ LLGPSGCGK+T LR+VAG  +PS G+IF
Sbjct: 5   NFVELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIF 64

Query: 62  FGEREVTHAPPHARDTGMVFQGYALFMHMSVAENVAFGLQMRKVPRAEQAARVKEALRLV 121
               +VTH     RD  MVFQ YALF HMS+ ENV +GL+M  VPRAE  ARVKEAL +V
Sbjct: 65  IDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMV 124

Query: 122 RLDHLADRRPAALSGGQQQRVALARALVVQPAVFLLDEPMSNLDARLRTEVRLEIRALQQ 181
            L+   DR    +SGGQQQRVALARAL+++P V L DEP+SNLDA LR  +R +IR LQ+
Sbjct: 125 DLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQK 184

Query: 182 RLGLTTLLVTHDQEEALTTADRLAVMDHGRVRQVGTPRQVYEQPVDQFVANFIGRCNLVP 241
           +  +T+L VTHDQ EA   +D + VM+ G + Q+G+P+ +Y QP  +F+A+F+G  NL P
Sbjct: 185 QFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFP 244

Query: 242 GRLDAPGVFRAGAHALPCAPFEGLQSTKNDLALMVRPDRIRIANAGEQGLPARVRLSTYL 301
                  V   G H LP     G   T+ +  + VRP+ I +++ GE+     +R   Y+
Sbjct: 245 ATFSDGYVDIYGYH-LPRPLHFG---TQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYM 300

Query: 302 GG----TTEWN 308
           G     T EW+
Sbjct: 301 GPQYEVTVEWH 311