Pairwise Alignments

Query, 358 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 378 a.a., spermidine/putrescine ABC transporter ATP-binding protein PotA from Escherichia coli ECRC101

 Score =  257 bits (656), Expect = 4e-73
 Identities = 145/324 (44%), Positives = 201/324 (62%), Gaps = 10/324 (3%)

Query: 4   LRLDNLQCTYDRTVAVRNLNLDVAQGELLALLGPSGCGKSTTLRMVAGFVQPSAGRIFFG 63
           ++L  ++  +D    +  L+L +  GE L LLGPSGCGK+T LR++AG     +GRI   
Sbjct: 18  VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLD 77

Query: 64  EREVTHAPPHARDTGMVFQGYALFMHMSVAENVAFGLQMRKVPRAEQAARVKEALRLVRL 123
             ++TH P   R    VFQ YALF HM+V ENVAFGL+M+K P AE   RV EALR+V+L
Sbjct: 78  NEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL 137

Query: 124 DHLADRRPAALSGGQQQRVALARALVVQPAVFLLDEPMSNLDARLRTEVRLEIRALQQRL 183
           +  A R+P  LSGGQQQRVA+ARA+V +P + LLDE +S LD +LR +++ E++ALQ++L
Sbjct: 138 ETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKL 197

Query: 184 GLTTLLVTHDQEEALTTADRLAVMDHGRVRQVGTPRQVYEQPVDQFVANFIGRCNL---- 239
           G+T + VTHDQEEALT +DR+ VM  GR+ Q GTPR++YE+P + FVA FIG  N+    
Sbjct: 198 GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNAT 257

Query: 240 VPGRLDAPGVFRAGAHALPCAPFEGLQ-STKNDLALMVRPDRIRIANAGE----QGLPAR 294
           V  RLD   V RA      C  +          L +++RP+ +R+    +    +GL   
Sbjct: 258 VIERLDEQRV-RANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGY 316

Query: 295 VRLSTYLGGTTEWNFETDVGPIAV 318
           VR   Y G T E   E + G + +
Sbjct: 317 VRERNYKGMTLESVVELENGKMVM 340