Pairwise Alignments

Query, 342 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score =  253 bits (647), Expect = 4e-72
 Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 9/319 (2%)

Query: 24  ALVLMAAPSWAQSNWPTKPVRIVVPFAAGGTTDILARAIAPELSRAFGQQFIVDNRAGAG 83
           A +   AP    + WP KP+R+VVP+AAGG  D  AR +A +LS A GQQ ++DNR GAG
Sbjct: 12  AAIAACAPLLGWAAWPDKPIRMVVPYAAGGGADNTARIVAQQLSAALGQQIVIDNRPGAG 71

Query: 84  GNLGAEIVARAPNDGYTLLMGTVGTHGINRALYPKLPFDPIKDFAPITLVAAVPNVMEMN 143
           G +GA+ VA+A  DGYT+L        +N +L  KLPFD  KDF P++LVA  P ++ + 
Sbjct: 72  GVIGADNVAKAAADGYTVLYDA-SAFSVNPSLR-KLPFDAAKDFIPVSLVATAPQILVVP 129

Query: 144 ADKAKALNIHNVQDFIKYAKANPGKLNMASSGSGTSIHLAGELFKSMTGTFMAHIPYKGS 203
            +         V +F+ +A+ NPGKL+ AS+G GT  HLAGE         + H+PYKG 
Sbjct: 130 ENAP----YKTVAEFLDFARKNPGKLSFASAGGGTGSHLAGEALNEQAKVNLMHVPYKGG 185

Query: 204 GPALLDMVGGNADVMFDNLPSSMAQIKAGKLTALAVTSAQRSPALPDIPTVEEVGGPSLK 263
            PAL D++GG     F N+ S+++ +K+GKL ALAV+S +R PALPD PT+ E G   L 
Sbjct: 186 APALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGESG---LP 242

Query: 264 GFEASSWFGLLAPAGTPPEIVNRIQQEVAKSLGTPAIKEKMLAQGALPSGNSPADFTKLI 323
           G+    W G+  P GTP +IV ++ + V  ++  P + +K+L  G  P+G +P  F + +
Sbjct: 243 GYNVVEWNGVFLPKGTPADIVQKLGKAVQAAINDPTVHQKLLQLGLEPAGTTPEAFARFV 302

Query: 324 ASEHVKWAKVVKDSGAKVD 342
             E  + + +V+    +VD
Sbjct: 303 QDEIGRVSALVRARNIRVD 321