Pairwise Alignments
Query, 1255 a.a., hypothetical protein from Variovorax sp. SCN45
Subject, 978 a.a., conserved protein of unknown function from Pseudomonas putida KT2440
Score = 225 bits (574), Expect = 1e-62
Identities = 134/408 (32%), Positives = 226/408 (55%), Gaps = 17/408 (4%)
Query: 831 PEPAKPVATAAATPAPAAADTGLAPVINFGPMSLVNGKIDFTDLFVKPNYSADLSELTGK 890
P+PA A A++ P P A I+ G + + +G +F DL + PN++ + +L G+
Sbjct: 557 PQPAD--APASSQPKPTTASNNKPLGIHIGQIDINDGSANFADLSLTPNFATAIQQLNGQ 614
Query: 891 LSSFSSNPPKGEGGRPALADLELRGKAQQTAALEITGKLNPLVKPIELDITAKMRDLDLA 950
+ + + P+ A ++++GK + A + I G LNP LDI + ++L
Sbjct: 615 IGTIDNRKPQP-------AKVDVKGKVDRYAPVTIKGALNPFNPLASLDIATSFKRVELT 667
Query: 951 PLSPYSVRYAGHGIERGKMSMDVNYKVAADGQLTATNKLVLNQLQFGDEVAGAPA-SLPV 1009
L+PYS ++AG I +G++++D++Y + +GQL A NK+V+ QLQ G++V A LP+
Sbjct: 668 TLTPYSGKFAGFRIRKGRLNLDLHYLIT-NGQLKAENKVVVEQLQLGEKVDSPDAVDLPI 726
Query: 1010 KLAVALLADRNGVIDVDLPLSGSLNDPQFSVGPLIWKAVVNLIVKAVTAPFSLLTGGLGG 1069
+LAVALL D G I ++LP+SG LN+PQFSV P++W+ + NL+++A APF + G + G
Sbjct: 727 RLAVALLKDTEGKISIELPVSGDLNNPQFSVMPIVWQTLRNLVLRAAQAPFKFIGGLISG 786
Query: 1070 GSGES-SAITFDAGSSDLSAAAKESLDKVAKALTDRPTLQMTVVGTASLEKERDAYQRQR 1128
GS E + F GSS+LS A+ SLDK+A AL +RP L++ + GT++ + +QR
Sbjct: 787 GSSEDLGNVAFAPGSSELSGEAQSSLDKLASALKERPELRLEIEGTSAQASDGPLIAQQR 846
Query: 1129 VRQLTLAEKRRVAVRGGQ---TGTDVPPVTDAEYPELLTAVYK-RADITKPRNLVGLAKD 1184
+ + A ++ R G + V D++ P +L +Y+ R P L +D
Sbjct: 847 LEREYQATWYKILQRRGDKVPANASMLVVDDSDKPAMLEGIYRTRLKQQPPAEWEQLGRD 906
Query: 1185 LPLKDMENLLFASVPVDEESMRQLAVERGAAVRDYLLAK-NLPSERLF 1231
+ + S +R L ER ++++DYL+ K L +R++
Sbjct: 907 ERAAKLREAVIKSWAESTALLRTLGQERASSIKDYLVDKGKLEDDRVY 954
Score = 90.1 bits (222), Expect = 8e-22
Identities = 164/671 (24%), Positives = 281/671 (41%), Gaps = 85/671 (12%)
Query: 1 LLSLLAFWAIAWLAVPPILKSQLQKIASEKLGRQVTVG----KVDFKPWTLELTLNDLRI 56
L SLL F + +A+ +IA+++L + TV +++ P++LELTL L+I
Sbjct: 18 LYSLLGFLILPGVAL---------RIANQQLAQYATVPAHLERIELNPFSLELTLWGLQI 68
Query: 57 ATADGSKPQVAIQRIYADAELQSVFRLAPVIDAVTIDAPAILLTHQADGKYDIDDIL-AK 115
+ K QV +R+YA+A L S++ A ++AV +D P + DG ++ +
Sbjct: 69 G--EPGKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDGTLNLTGLFKLP 126
Query: 116 LSSGPPADPNAKPARFAIYNIAINGGSVDFDDQTVKRRHELRDFVLKVPFLSNLDSKRDV 175
S P +P + P I +I + G + F+D E + + L NL + +
Sbjct: 127 ASEAKPEEPPSDPFPLRIGSIKLIDGYLHFEDLRPSEPIEFLYDNMNLE-LKNLSTLPND 185
Query: 176 NTEPKL-AFVLNGSKFD-SGALT-TPFAES---RKTDARVQFKGLDLVPYLGYIPGGLPV 229
N + L A NG + D G L+ +P A + TD +++ + Y+ +P+
Sbjct: 186 NADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKL-------FWPYVRDAVPL 238
Query: 230 RLQAG--SLDADLKIGFEHGATNGL-KISGTVEAHTTKVADARGRDLLAFESLKLALDDV 286
L+ G SLD K+ L +S + K D GR L SL+++ +
Sbjct: 239 VLEDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPD--GRPLARLASLEVSETSI 296
Query: 287 RPLESVFHLSEVALVNPQLAVARDAAGQLN---LLATDPATGATEKAAALPAA----PAT 339
++ + +V + A + GQL+ L A+ P T AT K A PAA P
Sbjct: 297 DLVKQQVTVGKVRSEKLETWAALEKDGQLDWQKLFASQP-TKATPKEKAEPAAAEPTPEE 355
Query: 340 PAAGQPAEKPVLKVQVDKIALSGGRIGWRDETVKPTAAVDVTELGLDVTAVIWPMDKPAQ 399
AA +P+ KP +V + + L + D + K A+D+ L D+ P
Sbjct: 356 KAAKEPS-KP-WQVLLKDVQLRNYLVHLADRSQKEPVALDIGPLNADLQGFDSLNQSPFT 413
Query: 400 FSGSTAIAGASLKFKGSATDKMADVETEVDA----LPLSLAAPYLAQSLEPTL-DGKLSG 454
T + G K + + +A + ++D + L +A Y++ + L G LS
Sbjct: 414 LKLDTGV-GKQGKLQAAGQVNLAPIWAKLDVSTRDIDLRVAQAYISPFILLELRSGMLSS 472
Query: 455 --QIDISWAQPDLKFKARRLAADGLALTQAKTALASVGRFELIDAEADMTKH--TLNVAS 510
++D+ P L F A T +++ ++ + H L++
Sbjct: 473 DLKVDLKNTAP-LAFNVTGKAQVSQLHTLDTIKSRDFVKWQQVNVDGLSYVHGDALSIDK 531
Query: 511 FTATNPKVRIERDNEKRWMFERWLKTPAGGGTKEAEAKVAA-PKPAAAEAPQPGANTKPW 569
T P R NE R L P + A+A ++ PKP A +N KP
Sbjct: 532 VTLLQPYARF-IINEDRTTNVNDLLIP-----QPADAPASSQPKPTTA------SNNKPL 579
Query: 570 ALTVGKLAIDNGALSYADKASATPVTMEVTAFKLLAQKIAPETNTVSPLEVSGRIGSGRS 629
+ +G++ I++G+ ++AD S TP TA + L +I G I + +
Sbjct: 580 GIHIGQIDINDGSANFAD-LSLTP--NFATAIQQLNGQI-------------GTIDNRKP 623
Query: 630 DPGRFDYKGNV 640
P + D KG V
Sbjct: 624 QPAKVDVKGKV 634
Score = 52.0 bits (123), Expect = 3e-10
Identities = 94/452 (20%), Positives = 158/452 (34%), Gaps = 76/452 (16%)
Query: 553 KPAAAEAPQPGANTKPWALTVGKLAIDNGALSYADKASATPVTMEVTAFKLLAQKIA--P 610
K A+EA + P+ L +G + + +G L + D + P+ L + ++ P
Sbjct: 124 KLPASEAKPEEPPSDPFPLRIGSIKLIDGYLHFEDLRPSEPIEFLYDNMNLELKNLSTLP 183
Query: 611 ETNTVSPLEVSGRIGSGRSDPGRFDYKGNVVLKPLAAEGRLEVASFPAHAFKAYYADALN 670
N L SG G GR D+KG + L P+A+EG L+V F Y DA+
Sbjct: 184 NDNADMTLVASGPNG------GRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDAVP 237
Query: 671 VDIRRAFASYRGTVHYTTTPAGMSIKLAGDTALDDFRANSVSLTQSPGFDRNTNQLLSWK 730
+ + S HY + LA T L ++VS+ +P
Sbjct: 238 LVLEDGVVSL--DTHY-------KLNLAKQTEL---LLDNVSVRIAP------------- 272
Query: 731 TLSLRGLQVSMAPNAAPTVDVRETTLTDFFARVIVDPTGRLNLLSLTKKGEAEATAAAAA 790
AP+ P + +++ +D + + + + E AA
Sbjct: 273 -------FAIKAPDGRPLARLASLEVSE----TSIDLVKQQVTVGKVRSEKLETWAALEK 321
Query: 791 AGEASTRKGPGGTTTTTTARAPAQRSTGRAVSAEEMVGGAPEPAKPVATAAATPAPAAAD 850
G+ +K T T + A+ + E+ A EP+KP
Sbjct: 322 DGQLDWQKLFASQPTKATPKEKAEPAAAEPTPEEK---AAKEPSKPWQ------------ 366
Query: 851 TGLAPVINFGPMSLVNGKIDFTDLFVKPNYSADLSELTGKLSSFSSNPPKGEGGRPALAD 910
+ + L N + D K + D+ L L F S +
Sbjct: 367 ------VLLKDVQLRNYLVHLADRSQKEPVALDIGPLNADLQGFDSL-------NQSPFT 413
Query: 911 LELRGKAQQTAALEITGKLNPLVKPIELDITAKMRDLDLAPLSPYSVRYAGHGIERGKMS 970
L+L + L+ G++N + PI + RD+DL Y + + G +S
Sbjct: 414 LKLDTGVGKQGKLQAAGQVN--LAPIWAKLDVSTRDIDLRVAQAYISPFILLELRSGMLS 471
Query: 971 MD--VNYKVAADGQLTATNKLVLNQLQFGDEV 1000
D V+ K A T K ++QL D +
Sbjct: 472 SDLKVDLKNTAPLAFNVTGKAQVSQLHTLDTI 503