Pairwise Alignments

Query, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 7e-46
 Identities = 146/537 (27%), Positives = 237/537 (44%), Gaps = 54/537 (10%)

Query: 46  TAKGFGDNPMLRSPQGTLTYSQAAVEVNRIAQVLTEDLGLVPGNRVLLRGGNSVAMALAW 105
           + K F D P   +   TL+Y++        A  L +   L PG R+ ++  N +   +A 
Sbjct: 33  SCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPGERIAVQMPNVLQYPIAV 92

Query: 106 LAVVKAGLIAVATMPLLRSKEL------------------GEIIEKAQP---VAALCDGR 144
              ++AGLI V T PL   +E+                  G+ +++  P   +  L + +
Sbjct: 93  FGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGKRVQEVLPDTGIEYLIEAK 152

Query: 145 LLDELATAQREHPVLATVI--------AFNQPDAPDSLSSRAAKKSGVFTACPTAA--DD 194
           + D L  A+    ++ TV+        A+  P A      +  ++    +  P +   DD
Sbjct: 153 MGDLLPAAKGW--LVNTVVDKLKKMVPAYRLPQAVPF--KQVLREGRGLSPKPVSLNLDD 208

Query: 195 IALLAFTSGTTGKPKAPVTTHRDVLA----MCETWPRH-----VLKARSDDIVVGSPPLA 245
           IA+L +T GTTG  K  + TH +++A    +   + +H      L     ++++   PL 
Sbjct: 209 IAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLLKDGQEVMIAPLPLY 268

Query: 246 FTFGLGGLLVFPMWAGASMYFPDAPFSPEGLVKLINQVGATISYTAPTFYRQMA--PFVK 303
             +      +  M  G        P    G +K + +   +      T +  +   P  +
Sbjct: 269 HIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFR 328

Query: 304 QHGMPSLRISVSAGEALPDATRQLWKEATGIEMLDGIGGTEVFHIY-ISAAGNEVRRGAV 362
           Q    +L+++ S G AL  AT + W++ TG  +++G G TE   +   +  G   R G V
Sbjct: 329 QLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGYGLTETSPVASTNPYGQLARLGTV 388

Query: 363 GKAVPGFTAKVVDNEGNEVPHGTVGKLALQGPVGCR-YLDDPRQADYVKN--GWNYPGDS 419
           G  V G   KV+D++GNE+P G  G+L ++GP   + Y   P       +  GW   GD 
Sbjct: 389 GIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAQALDAEGWFKTGDI 448

Query: 420 FVQDDDGYFFYQARADDMIITAGYNVGGPEVEDALLKHPAVAECGVIGKPDADRGMIVKA 479
            V D DG+     R  DMII +G+NV   E+ED ++ HP VA C  IG PD   G  VK 
Sbjct: 449 AVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCAAIGVPDERSGEAVKL 508

Query: 480 FCVLKPGQEGDAAMVKTLQDHVKATIAPFKYPREIEFVTALPRTETGKLQRFKLRQL 536
           F V + G       V  L+ + KA    +K P+ I    +LP T  GK+ R +LR +
Sbjct: 509 FVVPREG----GLSVDELKAYCKANFTGYKVPKHIVLRESLPMTPVGKILRRELRDI 561