Pairwise Alignments

Query, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

Subject, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  184 bits (468), Expect = 6e-51
 Identities = 149/547 (27%), Positives = 239/547 (43%), Gaps = 58/547 (10%)

Query: 32  PDQLNLVEELLDKATAKGFGDNPMLRSPQGTLTYSQAAVEVNRIAQVLTEDLGLVPGNRV 91
           PD+   ++ +L K + + F D P   +   T+TY +        A  L +   L PG+R+
Sbjct: 20  PDEFPNIQAVL-KQSCQRFADKPAFSNLGKTITYGELYALSGAFAAWLQQHTDLKPGDRI 78

Query: 92  LLRGGNSVAMALAWLAVVKAGLIAVATMPLLRSKELGEIIEKAQPVAALC---DGRLLDE 148
            ++  N +   +A    ++AGLI V T PL  ++E+      +   A +C      L ++
Sbjct: 79  AVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEK 138

Query: 149 LATAQREHPVLATVIA------------------------FNQPDAPDSLSSRAAKKSGV 184
           +    +   V+ T +A                        +N P A     + A  K   
Sbjct: 139 VVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQAVRFNDALALGKGQP 198

Query: 185 FTACPTAADDIALLAFTSGTTGKPKAPVTTHRDVLAMCETWPRHVLKARS---DDIVVGS 241
            T     A+D+A+L +T GTTG  K  + THR+++A       ++L+ R+    ++  G 
Sbjct: 199 VTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVA-------NMLQCRALMGSNLHEGC 251

Query: 242 PPLAFTFGLGGLLVFPMWAGASMYFPDAPF---SPEGLVKLINQVGATISYTAPTFYRQM 298
             L     L  +  F     A M   +      +P  L  ++ ++G    +    F    
Sbjct: 252 EILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELG---KWKFSGFVGLN 308

Query: 299 APFV--------KQHGMPSLRISVSAGEALPDATRQLWKEATGIEMLDGIGGTEVFHIYI 350
             FV        +     +L+I++S G AL  +  + WK  TG  + +G G TE   +  
Sbjct: 309 TLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGMTETSPVAA 368

Query: 351 SAAGNEVRRGAVGKAVPGFTAKVVDNEGNEVPHGTVGKLALQGPV---GCRYLDDPRQAD 407
                  + G +G  VP    KV+D+ GNE+P G VG+L ++GP    G    +D     
Sbjct: 369 VNPSEANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQREDATAEI 428

Query: 408 YVKNGWNYPGDSFVQDDDGYFFYQARADDMIITAGYNVGGPEVEDALLKHPAVAECGVIG 467
               GW   GD  V   DGY     R  DMI+ +G+NV   E+ED L   P V +C  IG
Sbjct: 429 LDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIG 488

Query: 468 KPDADRGMIVKAFCVLKPGQEGDAAMVKTLQDHVKATIAPFKYPREIEFVTALPRTETGK 527
            PD   G ++K F V+KPG        + + +H++A +  +K PR IEF  +LP T  GK
Sbjct: 489 VPDEKSGEVIKVFIVVKPGM---TVTKEQVMEHMRANVTGYKVPRHIEFRDSLPTTNVGK 545

Query: 528 LQRFKLR 534
           + R +LR
Sbjct: 546 ILRRELR 552