Pairwise Alignments

Query, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 3e-43
 Identities = 159/530 (30%), Positives = 238/530 (44%), Gaps = 42/530 (7%)

Query: 45  ATAKGFGDNPMLRSPQGTLTYS--QAAVEVNRIAQVLTEDLGLVPGNRVLLRGGNSVAMA 102
           AT     D+  L S    L YS  Q A +V   A+ L   LG+  G+RV +   N     
Sbjct: 26  ATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIA-LGVNTGDRVGIWSPNCAQWC 84

Query: 103 LAWLAVVKAGLIAVATMPLLRSKELGEIIEKAQPVAALCDG------------RLLDELA 150
           +  LA  K G I V   P  R  EL  ++ ++     +C               L+ ELA
Sbjct: 85  ILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELA 144

Query: 151 TAQREH------PVLATVIAFNQPDAPDSLSSRA-AKKSGVFT--ACPTAADDIAL---- 197
           +A          P L  VI+         L   A A+++G  +  AC      +      
Sbjct: 145 SAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPV 204

Query: 198 -LAFTSGTTGKPKAPVTTHRDVLAMCETWPRHVLKARSDDIVVGSPPLAFTFGLGGLLVF 256
            + +TSGTTG PK    +H ++L         +     D +V+   PL   FG+    + 
Sbjct: 205 NIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTARDRMVI-PVPLYHCFGMVMANLG 263

Query: 257 PMWAGASMYFPDAPFSPEGLVKLINQVGATISYTAPTFYRQMA--PFVKQHGMPSLRISV 314
            +  G++M +P+  F  E  ++ + +  ATI Y  PT +  M   P      + +LR  +
Sbjct: 264 CITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGI 323

Query: 315 SAGEALP-DATRQLWKEATGIEMLDGIGGTEVFHIYISAAGN---EVRRGAVGKAVPGFT 370
            AG   P +  R++  +    E+    G TE   + +    +   E+R   VG+  P   
Sbjct: 324 MAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRTQPQLE 383

Query: 371 AKVVDNEGNEVPHGTVGKLALQG-PVGCRYLDDPRQ-ADYVKN-GWNYPGDSFVQDDDGY 427
            K+VD +G  VP G +G+L  +G  V   Y D+P+  AD +   GW + GD  V D+ GY
Sbjct: 384 NKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGY 443

Query: 428 FFYQARADDMIITAGYNVGGPEVEDALLKHPAVAECGVIGKPDADRGMIVKAFCVLKPGQ 487
                R  DMII  G N+   E+E+    HPAVA+  VIG P +  G  + A+  L PG 
Sbjct: 444 VRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGH 503

Query: 488 EGDAAMVKTLQDHVKATIAPFKYPREIEFVTALPRTETGKLQRFKLRQLN 537
              +A V+ LQ   KA IA FK PR I FV   P T TGK+Q+F++R+++
Sbjct: 504 ---SATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMREIS 550