Pairwise Alignments

Query, 710 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

 Score =  587 bits (1514), Expect = e-172
 Identities = 348/693 (50%), Positives = 439/693 (63%), Gaps = 28/693 (4%)

Query: 26  GAGLSQVQRALRKLGLVRDIDFALYLPMRYEDETRIVRLADTRDGDLAQVEGVVTECEVV 85
           G G +  ++ L K+GL    D   +LP+RY+D TR+V +   R G  A +EGVV+  +V 
Sbjct: 14  GVGEAMAEK-LAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVVSGADVT 72

Query: 86  YRPRRQLIATIDDGSDTCQLRFFNFYPSQQKQLAVGARVRVRGEMRGGFVGRQIMHPTVK 145
              RR L+  + DGS    LRF++F  +Q++ L  G  +R  GE R G  G +I HP  +
Sbjct: 73  MGKRRSLVVRLGDGSGVLTLRFYHFSNAQKEGLKRGTHLRCYGEARPGASGLEIYHPEYR 132

Query: 146 AAGTALP-----NALTPVYSTVAGLAQPVLRREVRSGLARA---VLDETVPVQIG--FRG 195
           A     P       LTP+Y +  GL Q  LR   +  LA      L + +P ++   ++ 
Sbjct: 133 ALNGNEPPPPVEQTLTPIYPSTEGLTQQRLRLLCQQSLALLGPRSLPDWLPDELARDYQL 192

Query: 196 AWDLRASLSFLHYPTPDVAMATLEDHSHPAWQRIKAEELLAQQLSQLQARLERAAQRAPV 255
           A  L  ++ +LH P  D  +  L +  H A  R+  EELL  QLSQ + R    + RAPV
Sbjct: 193 A-PLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRLRESLRSLRAPV 251

Query: 256 LPSPAEPLASSLHAQLLAVLPFGLTGAQQRVGEEITRDLCREIPMHRLLQGDVGSGKTVV 315
           LP      A+ L AQ LA L F  TGAQQRV  EI  DL +  PM RL+QGDVG+GKTVV
Sbjct: 252 LPR-----ATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVGAGKTVV 306

Query: 316 AALAAARAIDAGFQCALMAPTEILAAQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERD 375
           AALAA +A++AG+Q ALMAPTEILA QH+     WL+PL    G+ VAWL G  K K R 
Sbjct: 307 AALAALQALEAGYQVALMAPTEILAEQHYITFKRWLEPL----GIEVAWLAGKLKGKARA 362

Query: 376 EMSAAVESGEAALVIGTHAVISEKVRFKNLALAIIDEQHRFGVAQRLALRGKAV-GELEP 434
                + +G A +V+GTHA+  E+VRFK+LALAIIDEQHRFGV QRLALR K V GEL P
Sbjct: 363 ASLEQIANG-APMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRLALRRKGVAGELCP 421

Query: 435 HLLMMSATPIPRTLAMSYYADLDVSTLDELPPGRTPIVTKLVADHRRDEVIDRIHAQIAQ 494
           H L+M+ATPIPRTLAMS YADLD S LDELPPGRTP+ T LVAD RR EV++R+ A  A+
Sbjct: 422 HQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAACAE 481

Query: 495 GRQVYWVCPLIEESEAVDLRNATETRDELTGTLGEPIQVGLLHSRMPTAEKQAVMAAFTA 554
           GRQ YWVC LIEESE +  + A  T +EL   LGE ++VGL+H RM  AEK  +MA F A
Sbjct: 482 GRQAYWVCTLIEESEELTCQAAESTYEELGSALGE-LKVGLIHGRMKPAEKAEIMAEFKA 540

Query: 555 NEIQVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLYAPG 614
             +Q+LV+TTVIEVGVDVPNASLM+IE+ ER GL+QLHQLRGRVGRG+A S CVLLY P 
Sbjct: 541 GNLQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHP- 599

Query: 615 DSGRVGEAARARLKAMAETGDGFEIARRDLEIRGPGEFLGARQSGAPLLRFADLTTDTLL 674
               + +  R RL  M ET DGF IA +DLE+RGPGE LG RQ+G    + ADL  D  L
Sbjct: 600 ---PLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADL 656

Query: 675 LDWARELAPVMLQKHPDLAQRHIDRWLGTKAEY 707
           L   R+ A  ++ + P+     +DRWL    +Y
Sbjct: 657 LPAVRDAAQALVSRWPEHVSPLLDRWLRHGQQY 689