Pairwise Alignments

Query, 195 a.a., Uncharacterized protein Tbd_1903 from Variovorax sp. SCN45

Subject, 573 a.a., conserved hypothetical TPR repeat protein from Pseudomonas putida KT2440

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 26/95 (27%), Positives = 44/95 (46%)

Query: 42  EALAKADTYIAGKPRDPQMRFLRGVILTEQNKQDEAIAAFTQLTQDFPELSEPYNNLAAL 101
           EAL      I   P D ++R      L EQ++  +A   F  L Q +P+  E   +LA +
Sbjct: 236 EALPLLRGAIRDNPDDKRLRLTYARTLVEQDRIADAKGEFISLVQQYPDDDELRYSLALV 295

Query: 102 YASQSKFDQARSALEQAIKLNPNYATAHENLGDVY 136
                 +D+A   L++ ++ +     AH NLG ++
Sbjct: 296 CLENKDWDEAEGYLQELVERDSYVDAAHLNLGRIH 330



 Score = 31.2 bits (69), Expect = 4e-05
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)

Query: 39  KPAEALAKADTYIAGKPRDPQMRFLRGVILTEQNKQDEAIAAFTQLTQDFPELSEPYNNL 98
           K A+A       I   P D  + + R ++  ++N   +       +    PE +   N L
Sbjct: 403 KDAQANQVLQQAIQRYPDDLNLLYTRAMLAEKRNDLTQMEKDLRAIITREPENAMALNAL 462

Query: 99  AALYASQS-KFDQARSALEQAIKLNPNYATAHENLGDVYARL----AAQEYVRAQQFAS- 152
               A ++ ++ +A++ +++A +L P+     ++LG V  RL    AA+ Y+R Q FA+ 
Sbjct: 463 GYTLADRTTRYTEAKALIDKAHQLTPDDPAVLDSLGWVNYRLGNLDAAETYLR-QAFANF 521

Query: 153 TNPSVAPKLALI----------RQIFTPKTEAEAAALPAAPTVIR 187
            +  VA  L  +          RQ++    EA+A +     T++R
Sbjct: 522 PDHEVAAHLGEVLWANGKRREARQVWAKGFEAQADSPILRKTLLR 566



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 33  TLLRQGKPAEALAKADTYIAGKPRDPQMRFLRGVILTEQNKQDEAIAAFTQLTQDFPELS 92
           TL+ Q + A+A  +  + +   P D ++R+   ++  E    DEA     +L +    + 
Sbjct: 261 TLVEQDRIADAKGEFISLVQQYPDDDELRYSLALVCLENKDWDEAEGYLQELVERDSYVD 320

Query: 93  EPYNNLAALYASQSKFDQARSALEQA-IKLNPNYATAHENLGDV 135
             + NL  ++  + + D A +  E A +   P+Y  A     D+
Sbjct: 321 AAHLNLGRIH--EERHDPAGALREYALVGPGPDYLPAQLRQADI 362



 Score = 24.3 bits (51), Expect = 0.005
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 34  LLRQGKPAEALAKADTYIAGKPRDPQMRFLR-GVILTEQNKQDEAIAAFTQLTQDFPELS 92
           L R G+  E++   +  + G+  D    FL      T+Q+ +D  + +F +L   +P+  
Sbjct: 127 LARAGRYDESMTYMEKVLQGQG-DTHFDFLALSAAETDQSTRDGLLHSFERLLVKYPDNG 185

Query: 93  EPYNNLAALYASQSKFDQARSALE 116
           +     A L     K ++A   LE
Sbjct: 186 QLIFGKALLLNQDGKTEEALELLE 209