Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 9e-45
 Identities = 106/294 (36%), Positives = 151/294 (51%), Gaps = 3/294 (1%)

Query: 1   MNLTLRQLRAFAAVAESGSFTAAAQQLHLTQSALSVLVRELEREMGVQLLDRNTRSVQLS 60
           M   L+ +R+F  +AE GSF  AA+ LHL+Q ALS  +++LE  +G  LL+R TR V L+
Sbjct: 1   MEYELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLT 60

Query: 61  EAGREFLPSVHRLLGDLAGAVAGVTDLRDKKKGLLRLAAPQLMACTLMPRVIAVYREKYP 120
             GR+FLP   RLL D   ++  + +L +++ G + LA     A   +P VI  Y E+YP
Sbjct: 61  SVGRDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYP 120

Query: 121 DVDVRLADTLPENLLAGVSAGDVELAVGQDVAVDGAIERRTLLRDRHWLICPPGHAFANR 180
            + +RL D    + L  V  G+ +  +         IE  +L+++   L C   H  ANR
Sbjct: 121 KIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANR 180

Query: 181 RKVRWHELEPYTFIAPTRDFRQRVLPELAPAERDYMLRP-GTQEVSYMTTALGMVASGLG 239
             V W EL  Y  I   R    R+L  L  A     LRP    EV +++T+LGMV +GLG
Sbjct: 181 ASVTWTELADYRLIGVGRLSGNRML--LDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLG 238

Query: 240 LTVCPTYSAPLVRAHGLRMVRLESPDFHREVCVYSAARRSLSPAATGFVEILEQ 293
           ++  P+ + P      L  V L  P   R + +      SLSPAA  FV IL Q
Sbjct: 239 VSAMPSLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSILLQ 292