Pairwise Alignments

Query, 458 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Variovorax sp. SCN45

Subject, 460 a.a., Cysteine--tRNA ligase from Pseudomonas putida KT2440

 Score =  488 bits (1257), Expect = e-142
 Identities = 253/463 (54%), Positives = 317/463 (68%), Gaps = 13/463 (2%)

Query: 3   LRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDFCHIGHARMMMAFDVVQRWLRASDYAV 62
           L IYNTLS+  E F PL   +VRMYVCGMTVYD+CH+GH R M+AFD+V RWLR S Y +
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61

Query: 63  AYVRNITDIDDKIIARSVQRGITIRELTDEVIAAMHEDIGALGIEPPTIEPRATEYVPQM 122
            YVRNITDIDDKII R+ + G T   LT  +I AMHED   L I PP  EPRAT+++  M
Sbjct: 62  TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121

Query: 123 LGIIEKLEHKGLAYRSDNGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPLDF 182
             +I+ L  KG AY   NGDV Y V KF GYGKLS K +++L  G R+ V + KQDPLDF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDEAKQDPLDF 181

Query: 183 VLWKAAKPTEPADAKWESAYGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHENE 242
           VLWK  KP EP+   WES +G GRPGWHIECS MS   LGE+FDIHGGG+DL+FPHHENE
Sbjct: 182 VLWKGVKPGEPS---WESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENE 238

Query: 243 IAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRTHY 302
           IAQSE A GK  +  W+H G +R++ EKMSKSL NFFTIR+VL+KY  E +R+ LV +HY
Sbjct: 239 IAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHY 298

Query: 303 RSALNYSDAHLDDARNSLKRLYTALDLVAPADVSIDWTQPYAARFKAAMDEDFGTPEAIA 362
           RSA+NYS+  L DA+ +L+R Y AL       V+    + +  RF  AM++DFGTPEA A
Sbjct: 299 RSAINYSEDSLRDAKGALERFYHALR--GLPRVAAKGGEAFVERFSVAMNDDFGTPEACA 356

Query: 363 VLFELAGEVNRTKSAET------AGLLKALAGSLGLLQGDPRSFLQAGS--TLDDAAIQA 414
           VLF+L  E+NR + ++       AG L+ L   LG+LQ +   FL+AG+   +D A ++ 
Sbjct: 357 VLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGAEGKVDAAEVEG 416

Query: 415 RIAERAAAKAAKNFAEADRIRQELLEQGIVLKDSPTGTTWAAA 457
            I  R  A+A KN+AE+DRIR +L   G+VL+DS   TTW  A
Sbjct: 417 LIQARLKARADKNWAESDRIRDQLTAMGVVLEDSKGTTTWRLA 459