Pairwise Alignments

Query, 458 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Variovorax sp. SCN45

Subject, 461 a.a., cysteinyl-tRNA synthetase (NCBI) from Escherichia coli BW25113

 Score =  481 bits (1239), Expect = e-140
 Identities = 251/465 (53%), Positives = 324/465 (69%), Gaps = 21/465 (4%)

Query: 3   LRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDFCHIGHARMMMAFDVVQRWLRASDYAV 62
           L+I+NTL+R+ EEF P+  G+V MYVCG+TVYD CHIGH R  +AFDVV R+LR   Y +
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61

Query: 63  AYVRNITDIDDKIIARSVQRGITIRELTDEVIAAMHEDIGALGIEPPTIEPRATEYVPQM 122
            YVRNITDIDDKII R+ + G +   + D +IA MH+D  AL I  P +EPRAT ++ ++
Sbjct: 62  KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121

Query: 123 LGIIEKLEHKGLAYRSDNGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPLDF 182
           + + E+L  KG AY +DNGDV + V   P YG LS + LD+L AG RV V+D K++P+DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181

Query: 183 VLWKAAKPTEPADAKWESAYGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHENE 242
           VLWK +K  EP+   W S +G GRPGWHIECSAM+C  LG  FDIHGGG+DL FPHHENE
Sbjct: 182 VLWKMSKEGEPS---WPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENE 238

Query: 243 IAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRTHY 302
           IAQS  A+      +W+H+G V VD EKMSKSLGNFFT+R+VL+ YDAE++R+FL+  HY
Sbjct: 239 IAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHY 298

Query: 303 RSALNYSDAHLDDARNSLKRLYTAL----DLVAPADVSIDWTQPYAARFKAAMDEDFGTP 358
           RS LNYS+ +L  AR +L+RLYTAL      VAPA       + + ARF  AMD+DF TP
Sbjct: 299 RSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG-----GEAFEARFIEAMDDDFNTP 353

Query: 359 EAIAVLFELAGEVNRTKSAETAGL------LKALAGSLGLLQGDPRSFLQAGSTLDD--- 409
           EA +VLF++A EVNR K+ + A        L+ L+  LGLL+ +P +FLQ+G+  DD   
Sbjct: 354 EAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEV 413

Query: 410 AAIQARIAERAAAKAAKNFAEADRIRQELLEQGIVLKDSPTGTTW 454
           A I+A I +R  A+ AK++A AD  R  L E GIVL+D P GTTW
Sbjct: 414 AEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTW 458