Pairwise Alignments

Query, 406 a.a., Uncharacterized protein with LysM domain, COG1652 from Variovorax sp. SCN45

Subject, 258 a.a., peptidoglycan-binding protein from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 1e-28
 Identities = 83/238 (34%), Positives = 120/238 (50%), Gaps = 28/238 (11%)

Query: 156 PTLNPSIIEPFLSEPIVVDADTLDSAPRIVAGNDNRVLLSRGDRAYARGNANSPLLEAPG 215
           PT   +I    L   I+     LD+AP IVA +  RVL + G+R +ARG+     LE   
Sbjct: 28  PTTQHAIQRFLLHNRILDTPQDLDNAPYIVAADAGRVLGANGERVHARGD-----LEPSQ 82

Query: 216 PVQSFRVFRSATPLKDPGTGEILGYEAQYLGKARLQRGESTTVETVEDKDVITVVPATVD 275
           P  ++ +FR      DP T E+LG  A  +G AR          T  D   + V   T  
Sbjct: 83  P--NYGIFRRGKVYTDPQTRELLGINADDIGTARFV--------TAGDLTTLAVQRVT-- 130

Query: 276 IIASREEIRAGDRLL-PEPPRQLLSYVPRAPSTQVEGRIISVYGNAVQFAAQNQVVAINK 334
                +E+R GDRLL  + P    ++     +  ++G+II +     Q    +  V +NK
Sbjct: 131 -----QEVRPGDRLLRAQTPVDPAAFAVTPATRFIKGQIIDIPKGVTQIGVLD-AVTLNK 184

Query: 335 GTRDGIDNGHVLAILKNGETILDR-TGARKETIKLPNERIGLLMVFRTFEKVSYALVL 391
           G RDG+  G +L+++K G T+ D  TG   +   LP+ER G L+VFRT+EK+SY LVL
Sbjct: 185 GRRDGLVEGQLLSVIKAGATVRDSLTGTPTQ---LPDERAGTLLVFRTYEKLSYGLVL 239