Pairwise Alignments

Query, 365 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Variovorax sp. SCN45

Subject, 365 a.a., putative Rossmann fold nucleotide-binding protein from Pseudomonas putida KT2440

 Score =  224 bits (571), Expect = 3e-63
 Identities = 142/304 (46%), Positives = 179/304 (58%), Gaps = 36/304 (11%)

Query: 61  GYPASLLEMADPPPMLYVLGA-ADYDLTQLGHSIAVVGSRNPTPQGATNARSFARALGEA 119
           GYPA L E+ D PP+L+V G  A  D  QL    A+VGSR  TP     AR+F+R L +A
Sbjct: 95  GYPALLAEIDDAPPLLFVAGEPALLDRPQL----AIVGSRRATPPALDTARAFSRYLAQA 150

Query: 120 GLPVVSGLALGVDGAAHQGALDAADAAGDEPRLATVAVVGTGLDRVYPARHRDLAHRITL 179
           G  + SGLA+GVDGAAH+ AL A           T+AV+GTGL ++YP RHRDLA  +  
Sbjct: 151 GFTITSGLAVGVDGAAHRAALQAGGG--------TIAVLGTGLQKLYPQRHRDLAQAMID 202

Query: 180 QG-LIVSELPLGTPPLTQNFPKRNRLIAGLARGTLVVEAALQSGSLITARLTSEQGKEVF 238
            G  +VSE PL   PL  NFP+RNR+I+GL+ G LVVEA+L SGSLITARL +EQG+EV+
Sbjct: 203 NGSALVSEYPLDAGPLPGNFPRRNRIISGLSLGVLVVEASLASGSLITARLAAEQGREVY 262

Query: 239 AIPGSIHSPQSRGCHALIRQGAKLVESVNDILEELPPLQLAGGASSASQRKSGNGNGSHT 298
           AIPGSIH P ++GCH LIR GA LVE+V  ILE L                 G  N    
Sbjct: 263 AIPGSIHHPGAKGCHQLIRDGALLVETVEQILESL----------------QGWQNLPPA 306

Query: 299 AADAETQAPSAEAPLLEALGFDPVSLDALSARTGWSAAALQAKLLSLELDGHVSRLPGGL 358
             D        + PLL  L   P + ++L+  +    A + A+L  LEL+G VS   G  
Sbjct: 307 VVD------KFDHPLLALLHAAPQTSESLAHCSEQPLADVLAQLTELELEGRVSNEAGRW 360

Query: 359 FQRS 362
           F R+
Sbjct: 361 FARA 364