Pairwise Alignments

Query, 626 a.a., Protein translocase subunit SecD from Variovorax sp. SCN45

Subject, 302 a.a., Sec translocation complex subunit SecF from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 9e-15
 Identities = 45/189 (23%), Positives = 98/189 (51%), Gaps = 4/189 (2%)

Query: 413 NDLALLLRAGSLAAPMEIIQERTIGPTLGADNIEKGFKSVMYGFLAIMVFMCAYYAL-FG 471
           N +A  L+      P ++ +   +GP +G +  ++G   ++     I++++   +   F 
Sbjct: 94  NKVAEALQKAGGDNPAKVKRVEFVGPQVGEELRDQGGIGMLLALGGILIYLAFRFQWKFA 153

Query: 472 LFSSIALAVNLMLLVAILSMLQATLTLPGIAAMALAIGVAIDSNVLINERVREELR--NG 529
           + + ++L  ++++ + ILS  Q T  L  +AA+   IG +++  +++ +RVRE  R    
Sbjct: 154 VGAIVSLIHDVVVTLGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVMRK 213

Query: 530 ASPQAAIHAGYERAWGTILDSNVTTLIAGIALLAFGSGPVRGFAVVHCIGIVTSMFSAVF 589
           AS    I+    +     + ++V+TL+A  ALL FG   + GF++   IG++   +S+++
Sbjct: 214 ASLIENINVSTTQTLLRTVATSVSTLLAIAALLFFGGDNLFGFSLALFIGVMAGTYSSIY 273

Query: 590 FSRGLVNFW 598
            +  +V  W
Sbjct: 274 IA-NVVLIW 281