Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  113 bits (283), Expect = 3e-30
 Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 18/246 (7%)

Query: 12  LVATAATFALGAQAQNRE-LTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLKIK 70
           L+A AAT  + A A   E L +   A Y PF  ++    +VGFD DI +A+  +  ++  
Sbjct: 8   LLAAAATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECS 67

Query: 71  IVNTPFTGIFGALNNGDVDLVISGVTINDKRKQSYDFTPPYFAARQLIALPKNSKV-TSL 129
           +V + + GI  ALN    D ++S ++I D+RKQ+ DFT PY++ +     PKN    T  
Sbjct: 68  VVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFKTDK 127

Query: 130 KDLAGKKIAVVSASTADDIASREFGKTSPDIRRFESTPLIISELAGGGVDAAMGDNGVIA 189
           + L GK I    A+ A       +     +I+ +++      +L  G +D      G++A
Sbjct: 128 ESLKGKVIGTQRATLAGTYLEDNY--PDVEIKLYDTQENAYLDLVSGRID------GILA 179

Query: 190 YRVAQNPDLKTIDDKSFPEEG--------FGIVVKKGDKALLDKLTAGLAAIRADGSYVT 241
            +  Q   LK+ D  +F  +G         GI V+KGD  L D L   LA I+ADG+Y  
Sbjct: 180 DKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKK 239

Query: 242 IYKKWF 247
           I  K+F
Sbjct: 240 INDKYF 245