Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score =  117 bits (292), Expect = 3e-31
 Identities = 66/225 (29%), Positives = 125/225 (55%), Gaps = 7/225 (3%)

Query: 30  LTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLKIKIVNTPFTGIFGALNNGDVD 89
           + V    TY PF+F++++ ++ GF++++   +AK+ G+K KI  T + GI  AL +  +D
Sbjct: 40  INVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLD 99

Query: 90  LVISGVTINDKRKQSYDFTPPY-FAARQLIALPKNSKVTSLK---DLAGKKIAVVSASTA 145
           +V++ VTI+++RK+ YDF+ PY  +  Q + L K ++  ++K   DLAGKK+ V   +  
Sbjct: 100 VVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNY 159

Query: 146 DDIASREFGKTSPDIRRFESTPLIISELAGGGVDAAMGDNGVIAYRVAQNPDLKTIDDKS 205
           +    ++  +   D+R +E  P   ++L  G +DA + D  + A   AQ      +   +
Sbjct: 160 EQWVKKDVPQA--DVRTYEDDPSKFADLRNGRIDAILIDR-LAALEYAQKAKDTELAGDA 216

Query: 206 FPEEGFGIVVKKGDKALLDKLTAGLAAIRADGSYVTIYKKWFNKD 250
           F     G+ ++KG+  LL  +   +  ++ADG+   + +K+F  D
Sbjct: 217 FSRLESGVALRKGEPELLAAINKAIDKLKADGTLAKLSEKYFGAD 261