Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score =  113 bits (282), Expect = 4e-30
 Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 15/252 (5%)

Query: 4   IRRVISLGLVATAATFALGAQAQNRELTVASSATYAPFAFENKDKQIVGFDIDIINAIAK 63
           +++ +  GL+A+ +     AQ     L  A+ A+Y PF F   D +I GFD+D+ NA+ +
Sbjct: 1   MKKALLAGLLASLSLSVSAAQT----LRFATEASYPPFEFVGTDNKIQGFDVDLANALCR 56

Query: 64  QQGLKIKIVNTPFTGIFGALNNGDVDLVISGVTINDKRKQSYDFTPPYFAARQLIALPKN 123
           +        N  F  +  +L     D V++G+ I  +R++   FT  Y+    L  + + 
Sbjct: 57  EMNATCTFSNQTFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFTKAYYDNSALF-IAQK 115

Query: 124 SKVTSLKDLAGKKIAVVSASTADDIASREFG--KTSPDIRRFESTPLIISELAGGGVDAA 181
            KV S++ L  K++ V + +T     S +    KT P    ++S    I +L  G +DA 
Sbjct: 116 GKVASVEALKDKRVGVQNGTTHQKYLSEKMTGIKTVP----YDSYQNAILDLKNGRIDAV 171

Query: 182 MGDNGVIAYRVAQNPDL----KTIDDKSFPEEGFGIVVKKGDKALLDKLTAGLAAIRADG 237
            GD  V+   + QN +L    + + DK++   G G+ V++G+  L ++    L  ++ADG
Sbjct: 172 FGDTAVVNEWLKQNTNLAPVGEKVTDKAYFGTGLGLAVRQGNSELQNQFNNALDKVKADG 231

Query: 238 SYVTIYKKWFNK 249
           ++ TIY KWF +
Sbjct: 232 TWKTIYDKWFQQ 243