Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 243 a.a., arginine ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  121 bits (304), Expect = 1e-32
 Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 10  LGLVATAATFALGAQAQNRELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLKI 69
           L L A  A+F  GA A  + +    SATY PF     + +IVGFDID+  A+ KQ   + 
Sbjct: 4   LVLAALLASFTFGASAAEK-INFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAEC 62

Query: 70  KIVNTPFTGIFGALNNGDVDLVISGVTINDKRKQSYDFTPPYFAARQLIALPKNSKVTSL 129
              N  F  +  +L     D VISG+ I  +R +   FT PY+     + + K     + 
Sbjct: 63  TFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYY-ENSAVVIAKKDTYKTF 121

Query: 130 KDLAGKKIAVVSASTADDIASREFGKTSPDIR--RFESTPLIISELAGGGVDAAMGDNGV 187
            DL GK+I + + +T       +     P+++   ++S      +L  G +D   GD  V
Sbjct: 122 ADLKGKRIGMENGTTHQKYIQDQ----HPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAV 177

Query: 188 IAYRVAQNPDL----KTIDDKSFPEEGFGIVVKKGDKALLDKLTAGLAAIRADGSYVTIY 243
           +   +  NP L    + + D  +   G GI V+  +KALL+KL   LAAI+ADG+Y  I 
Sbjct: 178 VNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKIN 237

Query: 244 KKWF 247
            +WF
Sbjct: 238 DQWF 241