Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  131 bits (329), Expect = 1e-35
 Identities = 73/241 (30%), Positives = 131/241 (54%), Gaps = 28/241 (11%)

Query: 10  WFRWDILVEYKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWVARFFL 69
           +F W+  ++     ++ A  T+ +T++   +    GL LA+ R +          AR ++
Sbjct: 3   FFDWNYAIQLLPELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRS----------ARIWI 52

Query: 70  RWPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPTSGLLIDGELARTLKQEHGALISGVV 129
            WP    + F R TPL +Q+  +++ +      P  G+ +             A+  GV+
Sbjct: 53  SWPIGGVIEFIRSTPLLIQVYFLYYVL------PNYGVSLT------------AMQVGVL 94

Query: 130 ALTLNSAAYISEVFRAGIQSISRGQFDAGRSLGFSPAQVMRYVVLPQAFRRMLPPLGNNA 189
            + L+ A Y++EV+R+G+ ++ RGQ++A  +L  SP+   R ++LPQA R +LPP+GN  
Sbjct: 95  GIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNMSPSLAYRNIILPQALRPILPPVGNYL 154

Query: 190 IALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTLLRRLEIR 249
           +A+LKDT ++SAI + E+   A+ +     RY EP   + V +  +++VL  L+RR+E R
Sbjct: 155 VAMLKDTPVLSAITVVEIMQQAKNIGSETFRYLEPITMVGVFFLALSIVLAYLVRRVEAR 214

Query: 250 L 250
           L
Sbjct: 215 L 215