Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., Glutamate transport membrane-spanning protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  133 bits (335), Expect = 3e-36
 Identities = 89/240 (37%), Positives = 128/240 (53%), Gaps = 26/240 (10%)

Query: 11  FRWDILVEYKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWVARFFLR 70
           F W  +     L  +GA MTL ++V    LG + GL + LA         W      F  
Sbjct: 3   FDWSAIWPAIPLLLEGAKMTLWISV----LGLAGGLVIGLAAGFARTFGGW------FAN 52

Query: 71  WPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPTSGLLIDGELARTLKQEHGALISGVVA 130
             A V++   RGTP+ VQ++ I+FA+   F    + L ID               + VV 
Sbjct: 53  HIALVFIEIIRGTPIVVQVMFIYFALPMAF----NDLRID------------PFSAAVVT 96

Query: 131 LTLNSAAYISEVFRAGIQSISRGQFDAGRSLGFSPAQVMRYVVLPQAFRRMLPPLGNNAI 190
           + +NS AYI+E+ R  + SI +G  +AG +LG S  + +R+V+LP A RRMLPPLGN  I
Sbjct: 97  IMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWI 156

Query: 191 ALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTLLRRLEIRL 250
             +KDTSL   IG+AEL    + +     R  E + A++V Y ++TLVL+ +LRRLE R+
Sbjct: 157 ISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216