Pairwise Alignments

Query, 284 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 27  SLLRIVVPAGIVIALLLIWEWTVRANNIPHYILPAPSLILRTLFDN------WDSLSSAL 80
           +L + + P  + + LL IW+  V A  +   ILPAPS ++    +       W  L+ + 
Sbjct: 8   NLTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISG 67

Query: 81  WFTVKLTLLALTAAIVGGVLLAIAF--ALFKWVEIGLFPIAVILQVTPIIAIAPLILIYV 138
           W         L   I G + L + F   L  W E  L     +++  P +A+ PL++++ 
Sbjct: 68  WRA------GLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWF 121

Query: 139 SSTTAALLLCAWIVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPY 198
               +A +    +   FPI  NT  G+++ D  L ++ + Y  S +  FR ++ P ALP 
Sbjct: 122 GIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPS 181

Query: 199 FMAGLKIAGGLSLIGAVVAEFTAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGI 258
            + G++ A G   +  +VAE  +  AG   G  +       +T++ ++  A++L ++LG 
Sbjct: 182 ILVGVRFALGFMWLTLIVAETISANAG--IGYLAMNAREFLQTDVVVL--AIVLYAVLGK 237

Query: 259 VIFIVFAALSRLVLGHWH 276
           +  +    L R+ L  WH
Sbjct: 238 IADLAARGLERVWL-RWH 254