Pairwise Alignments

Query, 284 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 263 a.a., aliphatic sulfonate ABC transporter permease SsuC from Dickeya dianthicola ME23

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 21/256 (8%)

Query: 32  VVPAGIVIALLLIWEWTVRANNIPHYILPAPSLILRTLF------DNWDSLSSALWFTVK 85
           ++P  + + L+ +W+       +   ILP+P  +  T +      + W  LS + W    
Sbjct: 12  LLPWLLPLLLVAVWQLASSVGWLSSRILPSPQAVAVTFWRLTRSGELWQHLSISTW---- 67

Query: 86  LTLLALTAAIVGGVL-LAIAF--ALFKWVEIGLFPIAVILQVTPIIAIAPLILIYVSSTT 142
               ALT   +GG L LA+ F   L +  E  L     +L+  P +A+ PL++++     
Sbjct: 68  ---RALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIEE 124

Query: 143 AALLLCAWIVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAG 202
           +A +    +   FP+  NT  G+++ D  L ++ + Y  S ++ FR +L P ALP  M G
Sbjct: 125 SAKIFLVALGTLFPVYLNTYHGIRNIDGGLLEMSRSYGLSGFRLFREVLLPGALPSIMVG 184

Query: 203 LKIAGGLSLIGAVVAEFTAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFI 262
           ++ + GL  +  +VAE    T    +G+    + +    +  ++  A++L +LLG +  +
Sbjct: 185 VRFSLGLMWLTLIVAE----TISASSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV 240

Query: 263 VFAALSRLVLGHWHES 278
           +  AL R+ L  WH S
Sbjct: 241 IALALERIWL-RWHPS 255