Pairwise Alignments

Query, 342 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 340 a.a., Riboflavin-binding protein RibY from Xanthobacter sp. DMC5

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 75/263 (28%), Positives = 112/263 (42%), Gaps = 14/263 (5%)

Query: 8   LRPLAFGLAL---AGAAFAAQAQEKV--VFATNWKAQAGHGGFYQALVDGTYKKYGLDVD 62
           L  LA G AL   A  A  A A + V       W  QA   GFY A+  G YK  G+D+ 
Sbjct: 8   LSTLAAGAALLSTAVGALPALAADPVPATLRLKWLPQAQFAGFYVAVAKGYYKAEGIDLT 67

Query: 63  IQQGGPMVNNRPMLPAGKVDFLMTGNLLQSFDNVKNGVPTVVVAAFFQKDPQAMFAHPGQ 122
           I  GGP +    ++  G   F ++G L   F     G+P V V    Q  P    A    
Sbjct: 68  INPGGPNILAENLVATGADTFGLSGGLDSVFAARDKGLPVVCVGISHQMTPFVFVARADG 127

Query: 123 GFDTFKDM--TKAPVAFIGKDGQFSFWQWMKSEHGFKDS--QLKPYTFNVGPFLADKKSI 178
              T +D    K    F G +      + M +++G   +   ++P   +V PF+  +  +
Sbjct: 128 PIKTLQDFKGKKVTTWFTGAN---HVLKAMLTKNGIDPALVDIQPQQVSVTPFVDGQVDV 184

Query: 179 QQGYAISEPLSIKAQAGFDPVVQLLA-DNGFSTYATTIETRADLIKNKPETVRKFIEASI 237
                 +E  +IK + G + +   +A D+G +    T+       K KPE V+ F+ ASI
Sbjct: 185 ITATRYNEYYTIKTRMGEEKLRTFVAEDSGITFPRDTLIVSETTAKEKPELVKAFLRASI 244

Query: 238 IGWNNYLYGDNKAANELIAKTNP 260
            GW +  + D K A + I K  P
Sbjct: 245 KGWKD-AFSDPKGAVDTIMKAAP 266