Pairwise Alignments

Query, 342 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 334 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 71/319 (22%), Positives = 118/319 (36%), Gaps = 21/319 (6%)

Query: 21  AFAAQAQEKVVFATNWKAQAGHGGFYQALVDGTYKKYGLDVDIQQG-GPMVNNRPMLPAG 79
           AFAA A   ++   NW   A H   Y A   G Y + G+D+ I+ G G  V+ + +   G
Sbjct: 24  AFAADAMSLML---NWTPTADHAPLYYAKAKGWYSEAGIDLSIEAGKGSAVSAQRVGTGG 80

Query: 80  KVDFLMTGNLLQSFDNVKNGVPTVVVAAFFQKDPQAMFAHPGQGFDTFKDMTKAPVAFIG 139
               L   +L  +      G     V   +   PQ  +     G +  KD     +    
Sbjct: 81  ST--LGISDLPTTIQAKGKGADVKAVMVIYANSPQGFYWLKSSGINGPKDFAGRKIGNPP 138

Query: 140 KDGQFSFWQWMKSEHGFKDSQLKPYTF-NVGP----FLADKKSIQQGYAISEPLSIKA-Q 193
            D     W     + G   + +   TF NV P         KS+           +KA +
Sbjct: 139 GDAARLMWPAFAKKAGLDPASV---TFVNVSPQAKVAALKSKSVDIISDFYNEHDLKARE 195

Query: 194 AGFDPVVQLLADNGFSTYATTIETRADLIKNKPETVRKFIEASIIGWNNYLYGDNKAANE 253
            G D   Q   D G + Y  ++      +   P  V+KF+  +   +   +         
Sbjct: 196 FGADLGFQAWRDAGVNVYGNSLIVNGPYLAKNPAQVKKFVAVTQRAYEACVKDFEPCLQA 255

Query: 254 LIAKTNPDSPIATLQGSIELMKKMGIVDSGESLTK-GIGAMDEARVKDFYDKMVKAGLYK 312
           L A  +  SP        +   ++  +   ++ TK  +GA D  RVK  Y+ +V + +  
Sbjct: 256 LTASVSGLSP----DNQRDQWNRIKQLMRDDTTTKVALGAFDGQRVKTDYE-LVSSLIGI 310

Query: 313 AGEVDLSKVVTTQFVNKGV 331
               D + + T +F++KGV
Sbjct: 311 DKPYDPATLFTNEFLDKGV 329