Pairwise Alignments

Query, 342 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 333 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 56/239 (23%), Positives = 90/239 (37%), Gaps = 11/239 (4%)

Query: 8   LRPLAFGLALAGAAFA-AQAQ-----EKVVFATNWKAQAGHGGFYQALVDGTYKKYGLDV 61
           L  L    ALA  A A AQAQ     +KV    NW   + H  F+     G Y   G+D+
Sbjct: 5   LPSLLAAAALATFAIAPAQAQGDKPKDKVTLMLNWYLYSEHAPFFLGKEKGFYADEGIDL 64

Query: 62  DIQQGGPMVNNRPMLPAGKVDFLMTGNLLQSFDNVKNGVPTVVVAAFFQKDPQAMFAHPG 121
           DIQ+G         + A    F    ++         G P       FQ  P ++     
Sbjct: 65  DIQEGRGSAVTAQAVAAKSATFGYI-DVTTMIKAAAKGAPLKSTGVLFQVSPMSVMGFSE 123

Query: 122 QGFDTFKDMTKAPVAFIGKDGQFSFWQWMKSEHGFKDSQLKPYT----FNVGPFLADKKS 177
           +   T KD+    VA    D     W      +  K  Q+K  +      +      +  
Sbjct: 124 KNIKTPKDIIGKTVAVTPGDSMSQMWPLFLKVNDIKPDQVKIVSGDGQTKLNAVTNGQAD 183

Query: 178 IQQGYAISEPLSIKAQAGFDPVVQLLADNGFSTYATTIETRADLIKNKPETVRKFIEAS 236
           +  GY + + + ++   G        AD+G +  ++ I T  +L+   P+ V++F+ AS
Sbjct: 184 LLLGYVMDQAIKLQDATGKPVTPIRFADSGVNQISSGIITNKNLLTENPDLVKRFMRAS 242