Pairwise Alignments

Query, 455 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 455 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  158 bits (399), Expect = 4e-43
 Identities = 137/472 (29%), Positives = 219/472 (46%), Gaps = 86/472 (18%)

Query: 21  LLASCGGGGGNNGGGAFLPIVP--------------------PVVTKYVVGGTV-TGLAG 59
           LLA+CGGGGG +GG   L   P                    P +T      T+  G+A 
Sbjct: 23  LLAACGGGGGGSGGFPGLAAAPAPAPAPQGTQTPATTQDETTPAITTQPSDTTIGQGVAA 82

Query: 60  SLVLQ--NNAGDDLQVTADGKFSFATAIAAGSNYAVTVRTQ----PFWQFCTVTKGSGTV 113
           +L +Q  +      Q +ADG  S+     A  +  +T   Q           VT  +G+V
Sbjct: 83  ALKVQTVHATAYQWQRSADGGASWTDVPGANGDRFITGANQLADSGHQLRVRVTGNNGSV 142

Query: 114 TADVGDVAVACSAAKPQVSTLAGSGASGALDGKGTAATFADPFGIVIDKNGGLIVSDVAG 173
           T+    + V     +P V+ +  +          T  +++ P+ +++D +G  +   + G
Sbjct: 143 TSRAATLTV-----RPWVANVLAT----------TGVSYSHPYQLLLDASGASLYVAMGG 187

Query: 174 NRVRKITANGDVTTFAGDGKFETINGNGGVAS----FNALTAIALAPSGDLYAAEFSGNR 229
           N        G V       K +T  GNG   +     N    +ALA  G LY ++   +R
Sbjct: 188 N--------GSVY------KIDTGTGNGAEVTPGMTMNTPYGLALAADGTLYVSD--QHR 231

Query: 230 IRRITPAADVTTF---LGTNTAGSVDGNAATASFTGPIAMTVDGAGNLYLAELNTSLIRK 286
           I +I  AA+ TT+   +G+ T+G  D + ATA F  P ++ +DGAGNL++A+     +RK
Sbjct: 232 INKI--AANTTTYSTWVGSGTSGYAD-SPATALFNNPASIALDGAGNLFVADTENKRVRK 288

Query: 287 ITPAGDVETLAGSGGFGYAEGTGSAASFYRPYGIAVDAAG-DIFVADSENNRIRR--VKG 343
           +   G   TLAG G   Y +G G+AA   RP G+A+ + G  ++  D+++  +R+  V  
Sbjct: 289 VAADGTTSTLAGDGTQAYLDGVGTAAQLARPQGLAISSDGATLYDTDTDSPCLRKIDVAS 348

Query: 344 RVVTTFAGSGAPGAADGEALSATFNRPG------GLAFDTAGNLYVADTSNSILRKITPQ 397
             V+T  G  A G A    +  T   P       G+  D   N+++    + + R +TP 
Sbjct: 349 ATVSTLLGDCANGNAGAGVVDGTAATPAKLGYSYGVTVDAHDNVFLTQAWDGVARVVTPT 408

Query: 398 GVVSTVAGQAGVMGSQNGIGSAATFSQPSGVAVAADGTIYVADTLGNRIRKI 449
           G +ST+         ++G G+A TF+ P GVAVA DGT+YV  + GN+I K+
Sbjct: 409 GEISTL---------RDGNGAAITFNFPIGVAVADDGTVYVGASNGNQIFKL 451



 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 86/290 (29%), Positives = 122/290 (42%), Gaps = 26/290 (8%)

Query: 16  AGAIALLASCGGGGG------NNGGGAFLPIVPPVVTKYVVGGTVTGLAGSLVLQNNAGD 69
           A   +L  + GG G         G GA    V P +T     G      G+L + +    
Sbjct: 176 ASGASLYVAMGGNGSVYKIDTGTGNGAE---VTPGMTMNTPYGLALAADGTLYVSDQ--H 230

Query: 70  DLQVTADGKFSFATAIAAG-SNYAVTVRTQPFWQFCTVT-KGSGTV-TADVGDVAVACSA 126
            +   A    +++T + +G S YA +  T  F    ++   G+G +  AD  +  V   A
Sbjct: 231 RINKIAANTTTYSTWVGSGTSGYADSPATALFNNPASIALDGAGNLFVADTENKRVRKVA 290

Query: 127 AKPQVSTLAGSGASGALDGKGTAATFADPFGIVIDKNGGLIV-SDVAGNRVRKI-TANGD 184
           A    STLAG G    LDG GTAA  A P G+ I  +G  +  +D     +RKI  A+  
Sbjct: 291 ADGTTSTLAGDGTQAYLDGVGTAAQLARPQGLAISSDGATLYDTDTDSPCLRKIDVASAT 350

Query: 185 VTTFAGDGKFETINGNGGVASFNALTAIALAPSGDLYAAEFSGNRIRRITPAADVTTFLG 244
           V+T  GD      NGN G    +  TA   A  G  Y      +    +T A D    + 
Sbjct: 351 VSTLLGD----CANGNAGAGVVDG-TAATPAKLGYSYGVTVDAHDNVFLTQAWDGVARVV 405

Query: 245 TNTAGSV----DGNAATASFTGPIAMTVDGAGNLYLAELNTSLIRKITPA 290
           T T G +    DGN A  +F  PI + V   G +Y+   N + I K+T A
Sbjct: 406 TPT-GEISTLRDGNGAAITFNFPIGVAVADDGTVYVGASNGNQIFKLTLA 454



 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 20/148 (13%)

Query: 310 SAASFYRPYGIAVDAAG-DIFVADSENNRIRRVKGRVVTTFAGSGA---PGAADGEALSA 365
           +  S+  PY + +DA+G  ++VA   N  + ++      T  G+GA   PG         
Sbjct: 162 TGVSYSHPYQLLLDASGASLYVAMGGNGSVYKID-----TGTGNGAEVTPGM-------- 208

Query: 366 TFNRPGGLAFDTAGNLYVADTSNSILRKITPQGVVSTVAGQAGVMGSQNGIGSAATFSQP 425
           T N P GLA    G LYV+D     + KI       +    +G  G  +   + A F+ P
Sbjct: 209 TMNTPYGLALAADGTLYVSDQHR--INKIAANTTTYSTWVGSGTSGYADS-PATALFNNP 265

Query: 426 SGVAVAADGTIYVADTLGNRIRKIAPVG 453
           + +A+   G ++VADT   R+RK+A  G
Sbjct: 266 ASIALDGAGNLFVADTENKRVRKVAADG 293