Pairwise Alignments

Query, 218 a.a., Probable lipoprotein YiaD from Variovorax sp. SCN45

Subject, 230 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 5e-23
 Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 29/226 (12%)

Query: 6   LATVATALVLSGCAG-GMTDTQRNTGIGAGVGALGGAAIGAATGGRTGVNTGLVVGAAAG 64
           L  V    VL+GCAG   TD  +     A VG +GGAA+GA     +    G ++G   G
Sbjct: 8   LPLVLLTSVLTGCAGLQKTDWPKC----AAVGGVGGAALGAIESS-SWAGWGALLGG--G 60

Query: 65  ALGGYLWSQR--------MENQKRQMEAATQGTGIAVTQTPNNEL-----------KLQI 105
              GY W+          + + + +     +G  +     P   +           ++ +
Sbjct: 61  LAAGYCWAHGDGDEDGDGVPDSRDKCPGTPRGVQVDANGCPPEPVAVVEEVVVQKEEVIV 120

Query: 106 PSDVSFDVGRANIKSNFAPVLDQFANGLRSN-PNAEVRIIGHTDSTGSDAINNPLSVERA 164
             DV F+   A + ++    L+  A  L+   P+A + + GHTDS GSD+ N  LS  RA
Sbjct: 121 IRDVHFEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERRA 180

Query: 165 ASTRDYLVARGVNPGAF-RIEGRGSREPIADNNSDSGRAQNRRVEI 209
            S  DYLV  GV   +F  + G G  +P+ADN +  GRA NRR EI
Sbjct: 181 HSVTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEI 226