Pairwise Alignments

Query, 300 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 318 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 25/221 (11%)

Query: 92  GNLALYHWSMTLTTLANSNLLANLAPIFVVLGSNLFLGKKFNSGFLFGMLFALAGAFILI 151
           GN  LY   +   +   + L+  + PIF+++ S     ++F+ G + G+   +AG  +  
Sbjct: 86  GNYVLYLVGLKRLSPGTAQLVVQMGPIFLMIASVFVFKERFSRGQVLGLFVLIAGFGLFF 145

Query: 152 GHRLDFGSSYMAGNLLGLLTAVFYGSYLLAVSLVRSNYRTMTVMAWSSVGTLIVL-LPIT 210
             RL+   + +     G+LT +   S  +  +L +    T+    W+S+  ++V+ L   
Sbjct: 146 NQRLEELLTSLGAYTAGVLTILLATSIWVFYALGQKQLLTV----WNSLQVMMVIYLTCA 201

Query: 211 LLRGESLVP--HTLHGM------LMLLALALISHVGGQGLIAYALAKLPAALSSITLLIQ 262
           LL    L P  H L  +        LL    ++ +   G  A ALA   A+  S TL + 
Sbjct: 202 LL----LTPWAHPLEALDLSPLQAWLLLACCMNTLVAYGAFAEALAHWEASRVSATLALT 257

Query: 263 PV---IATVLGAYLFHEYLSVTE-----FVGGVIILVGIVT 295
           P+   +A  L A+L+  Y+   E     + G +++++G  T
Sbjct: 258 PLVTFVAVALAAWLWPAYVQAEEINALGYAGALVVVLGSAT 298