Pairwise Alignments

Query, 227 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-32
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 3/199 (1%)

Query: 6   DFAPVLAQWPL--LLEGAWTTVQLSFLATVLGFALGTVCALGRNSKHGWLRGLTGGYVEA 63
           D   V   W L  L+ G WTT+ LS ++ +LG  +G    L R S +  LR L+  YVE 
Sbjct: 104 DVVGVTRHWALGPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVEL 163

Query: 64  IRNTPLLIQSYFLIFGLSSAGVTMPIMVGAVLALVVNIGAYSCEIIRAGIESIHKGQLEA 123
           +R TPLL+Q +   F + +  + +      + AL +  GAY  EI+RAG++SI +GQ EA
Sbjct: 164 VRGTPLLVQIFIFYFFIGTV-LNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEA 222

Query: 124 AECLGLSKVQVFWHVILRPAVERVYPALASQFVLLMLASSIMSSIGAEELFGVANRIQSD 183
           A  LGLS  Q   HV+L  A +RV P LA QF+ L+  +S++S I   EL      + + 
Sbjct: 223 ARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITT 282

Query: 184 TFRNFEIFIVLWVVYLALS 202
           +F  FEI   +  +YL ++
Sbjct: 283 SFSPFEILFCVAGLYLLIN 301