Pairwise Alignments

Query, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 2e-33
 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 9/207 (4%)

Query: 10  GFLLMGAWGTLQLSALAFIGGGLIGLAVALARVSPAKAVRMAAAGYIQVIQGTPLLVLMG 69
           G L+ G W TL LS ++ I G +IGLA  L R+S    +R  +  Y+++++GTPLLV + 
Sbjct: 115 GPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIF 174

Query: 70  VCFFGPNIAGIGSVPALA---AAALAITIYASAFLGEIWRGCIQAVPRSQWEAAECLALT 126
           + +F      IG+V  L+   A   A++++  A++ EI R  +Q++ R Q EAA  L L+
Sbjct: 175 IFYFF-----IGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLS 229

Query: 127 RIERMRRVILPQALRIATPPTVGFLVQIIKNTSIASLVVGYAELSYNAKVLNNSTFQPFL 186
             + MR V+LPQA +   PP  G  + ++K+TS+ S V+   EL  + + +  ++F PF 
Sbjct: 230 ASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVS-VIAITELLKSGREVITTSFSPFE 288

Query: 187 YFGCAVVLYFILCYPLSRWSRALERKL 213
              C   LY ++  PLS+ +  LER+L
Sbjct: 289 ILFCVAGLYLLINLPLSKMASRLERRL 315