Pairwise Alignments

Query, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 1e-29
 Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 9/207 (4%)

Query: 10  GFLLMGAWGTLQLSALAFIGGGLIGLAVALARVSPAKAVRMAAAGYIQVIQGTPLLVLMG 69
           G L  G W TL +S ++   G +IGL   L R+S    +R  +  Y+++++GTPLLV + 
Sbjct: 116 GPLAWGLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIF 175

Query: 70  VCFFGPNIAGIGSVPALA---AAALAITIYASAFLGEIWRGCIQAVPRSQWEAAECLALT 126
           + +F      IG+V  L+   A   A+ ++  A++ EI R  +Q++ + Q EAA  L L 
Sbjct: 176 IFYFF-----IGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLN 230

Query: 127 RIERMRRVILPQALRIATPPTVGFLVQIIKNTSIASLVVGYAELSYNAKVLNNSTFQPFL 186
             + MR VILPQA +   PP  G  + ++K+TS+ S V+   EL+ + +    ++F  F 
Sbjct: 231 AGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVS-VIAITELTKSGREAITTSFSTFE 289

Query: 187 YFGCAVVLYFILCYPLSRWSRALERKL 213
            + C   LY ++  PLS  +  LER+L
Sbjct: 290 IWFCVAGLYLLINLPLSHIASRLERRL 316