Pairwise Alignments

Query, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 3e-30
 Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 2/213 (0%)

Query: 6   AEHFGFLLMGAWGTLQLSALAFIGGGLIGLAVALARVSPAKAVRMAAAGYIQVIQGTPLL 65
           A+    +L GAW TLQ++    +   +     AL ++S  + +R     YI++ +GT LL
Sbjct: 2   ADLLPLMLQGAWVTLQITFFGSLLAIVAATLAALGKMSTWRPLRWFCVVYIEIFRGTSLL 61

Query: 66  VLMGVCFFGPNIAGIG-SVPALAAAALAITIYASAFLGEIWRGCIQAVPRSQWEAAECLA 124
           V +   FF   +      +     A + + ++  A+  EI RG I +V + Q+EA   L 
Sbjct: 62  VQLFWLFFVLPLPPFNLELSPYTVAIVGLGLHIGAYGAEIMRGAINSVAKGQYEACTALN 121

Query: 125 LTRIERMRRVILPQALRIATPPTVGFLVQIIKNTSIASLVVGYAELSYNAKVLNNSTFQP 184
                R RR+ILPQAL  A  P    L++++KNTS+ SL+   A+LS+ A+ L+ +TF+ 
Sbjct: 122 FRPFTRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLIT-LADLSFRARQLDQATFET 180

Query: 185 FLYFGCAVVLYFILCYPLSRWSRALERKLNAAR 217
              F  A+++YF++   ++   R LER L   R
Sbjct: 181 LKVFALALLMYFVMAQAINLAMRRLERHLARGR 213