Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 6/232 (2%)

Query: 41  MAAKKIRVAIDLAVPPYGLKDEKLNATGSDVETARLLAKSLGLELEIVPTTGANRIPFLQ 100
           MAA+K+R+ I+ A PP+  KD   N  G D +    L   + +E  +V +     IP L 
Sbjct: 22  MAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSVVTSDWDGIIPALN 81

Query: 101 TDKADIVISSMSVTPEREKVVDFSVPYAAILAVVGAPKSMTITGPADLAGKKVIATRGTT 160
             K D ++SS+S+T ER++ VDF+ PY +      APK++      +    KVI T+  T
Sbjct: 82  AKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRAT 141

Query: 161 NDQEVTKILPAGTQIVRFDDDATSITAVVSGQAD-IFATAPPLLKTINEKNPAK-QMEPK 218
                 +      +I  +D    +   +VSG+ D I A      + +  K+ +  + + +
Sbjct: 142 LAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGE 201

Query: 219 FTMKVNMLAIGMRKNEPRLKAKLDEFVKAQLKSGELNTIYKKFHGADLPADV 270
             M  + + I +RK + +L+  L++ + A++K+   +  YKK +    P  +
Sbjct: 202 PVMDSDKIGIAVRKGDTKLRDDLNKAL-AEIKA---DGTYKKINDKYFPFSI 249