Pairwise Alignments

Query, 312 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 4e-48
 Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 2/293 (0%)

Query: 3   LRRLNPPLNLLRAFSTVVRFGGVSRAAEALHLTQGAVSKQVQELERWIGAPLFERNRKRL 62
           +RR  P    L  F    R    ++AA+ L LTQGAV +Q+  LE ++   LF R+R+ +
Sbjct: 1   MRRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGV 60

Query: 63  ALTPAGERYEKAVRALLAQLEAATLELITSGDGGGALHLSTLPTFGAKWLIPRLPDFQRA 122
            LT AG  Y + V A L  +E  TL ++    G   + L+ +PTFG +WL+PRL DFQ+ 
Sbjct: 61  RLTEAGLSYSRQVAAQLDAVERDTLSVMRQ-QGANVIELAVVPTFGTQWLLPRLKDFQQR 119

Query: 123 HPQITLHFVPFVHGYDFERPELDCAILFGDGHWPGAQSHYLAGQDVALIAPRAAQAEVAI 182
           HP++T++       + F     D AI FGD  W G QSH L G++   +   A      +
Sbjct: 120 HPEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGM 179

Query: 183 RTPQDVARCTLLRHVTVPQSWLQWSETHGVRGLDPLAGPQFDQFQTMIRAVMVGMGVALV 242
              + +A+  LL+  T P +W QW  + G+     + GP+++ F  + +A M  MG+AL+
Sbjct: 180 LEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALI 239

Query: 243 PRCLVQDEISSGLVDEPLPGGGYRGNEGYWFCYPEGRGQLATLDHFRSWLLAE 295
           P  L+Q E+  G +           ++ Y+   PE + + A+L  FR WL+++
Sbjct: 240 PPFLIQRELEEGRL-VVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQ 291