Pairwise Alignments

Query, 546 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

 Score =  104 bits (260), Expect = 8e-27
 Identities = 95/324 (29%), Positives = 145/324 (44%), Gaps = 42/324 (12%)

Query: 160 SNEHDARDIPLEGKTSMTVGMGMTEKQGGSDVRTNTTRAVPAGSGPWGEEFLITGHKWFF 219
           S+E  A  +P       T  M +TE   G+D+    T+AVP G G     F I+G K F 
Sbjct: 143 SDEQKATYLPNMVSGVWTGTMNLTEPHSGTDLGLIKTKAVPNGDG----SFAISGTKIFI 198

Query: 220 SAPMCDG-----HLVLAKT-----DEHGSSCFFVPRWRPD-----GGKNAIHIQRLKDKV 264
           SA   D      HLVLAKT        G S F VP++  +     G +NA+    L+ K+
Sbjct: 199 SAGEHDLAENIIHLVLAKTPGAPDSSKGISLFVVPKFIVNEDGSLGDRNAVSCGSLEHKM 258

Query: 265 GNRSNSSSEVEFKDAWGVLVGDEGRGIPTIIEMATVTRLDCALSSAGFMRQAFAQAAHYT 324
           G   N++  + +  A G LVG+E +G+  +  M    RL   L   G    AF  A HY 
Sbjct: 259 GIHGNATCVMNYDGAKGWLVGEENKGLAAMFIMMNAARLGVGLQGLGQGEIAFQNAVHYA 318

Query: 325 RNRFAFGKAL--------------IHQPVMTELLADMAL-ESEGAMLLAMELASRFGSDA 369
           ++R   G+AL              +H  V   L+   AL E   A++L   L       A
Sbjct: 319 KDR-RQGRALTGPKEPEEKADTLFVHPDVRRMLMEGKALTEGLRALILWGALQHDLSHSA 377

Query: 370 PLDTAWR------RLLTPAAKFWNCKRAVALTGEAMEVFGGNGYVEDGPMGRLFREAPVN 423
             +   +      +LLTP  K +   +   +   + +VFGG+GY+ +  + +  R+A + 
Sbjct: 378 ATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVSSQQVFGGHGYIWENGVEQYVRDARIA 437

Query: 424 SIWEGSGNVMCLDVL-RAVSRNPG 446
            I+EG+  V  +D++ R +  N G
Sbjct: 438 QIYEGTNGVQAMDLVGRKLPMNGG 461