Pairwise Alignments

Query, 546 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 97.4 bits (241), Expect = 8e-25
 Identities = 93/350 (26%), Positives = 148/350 (42%), Gaps = 50/350 (14%)

Query: 110 PSAW----VGYGASLYMHSQIESGS-TCPTTMTK----ACIPVMRRNAALYAELRGKLAS 160
           P  W     GY A      +I +G   C T M+      C+P++R               
Sbjct: 54  PEQWGGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILR-------------FG 100

Query: 161 NEHDARDIPLEGKTSMTVG-MGMTEKQGGSDVRTNTTRAVPAGSGPWGEEFLITGHKWFF 219
           NE           T   +G   +TE Q GSD  +  TRA   G     + +++ G K F 
Sbjct: 101 NEQQKEQFLTPLATGAMLGAFALTEPQAGSDASSLKTRARLEG-----DHYVLNGSKQFI 155

Query: 220 SAPMCDGH-LVLAKTD----EHGSSCFFVPRWRPDGGKNAIHIQRLKDKVGNRSNSSSEV 274
           ++    G  +V A TD    + G S F VP   P        + R++DK+G  ++ + ++
Sbjct: 156 TSGQNAGVVIVFAVTDPEAGKRGISAFIVPTDSP-----GYQVARVEDKLGQHASDTCQI 210

Query: 275 EFKDAWGVL---VGDEGRGIPTIIEMATVTRLDCALSSAGFMRQAFAQAAHYTRNRFAFG 331
            F +    +   +G EG G    +      R+  A  + G  R AF  A  Y   R +FG
Sbjct: 211 VFDNVQVPVANRLGAEGEGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFG 270

Query: 332 KALIHQPVMTELLADMALESEGAMLLAMELASRFGSDAPLDTAWRRLLTPA--AKFWNCK 389
           K LI    +   LADMA +   A  + +  A+       L  A R  L  A  AK +  +
Sbjct: 271 KPLIEHQAVAFRLADMATKISVARQMVLHAAA-------LRDAGRPALVEASMAKLFASE 323

Query: 390 RAVALTGEAMEVFGGNGYVEDGPMGRLFREAPVNSIWEGSGNVMCLDVLR 439
            A  +  +A++  GG GY+ D P+ R++R+  V  I+EG+ ++  + + R
Sbjct: 324 MAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIAR 373