Pairwise Alignments

Query, 302 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 27/278 (9%)

Query: 6   IMKRIAGLLLATVTLATAAVAAQAQELIGTLAKARASGTIAIGYRESSVPFSFLNTRKEP 65
           ++K+    LL  VT   A  AAQA    G +  A   GT+ +G   + +PF   N R E 
Sbjct: 1   MIKKYLSRLLVGVTALVAVTAAQA----GAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEI 56

Query: 66  IGYSIELCRSLVSAIEDAVNKSLAIQWVPVTS--DSRIDAVVSGKVDLECGSTTNNLERQ 123
           IG+ +++ +        A+ KS+ +++  V++  D  I A+++ K D+     T   ER 
Sbjct: 57  IGFEVDILK--------AMAKSMGVKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERN 108

Query: 124 KRVSFSPTMFVSGTKVLVRK--GSPIKSFRDLAGRKVAVTA--GTTNEKTLRDLSAKFKL 179
            R++FS    V G  +L+RK     IKS++DL   K  +T+  GTT E   + L +K K 
Sbjct: 109 LRLNFSEPFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKY 168

Query: 180 -GIDLLVARDHAESFGLVKSGQADAFATDDVLLYGLIAQDAAKADYEV-VGDFLSYDPYG 237
            G D     +  E+   V +G+ADAF  D    Y ++A D A A   + + +  +Y+P  
Sbjct: 169 HGYD-----NEQEAVMDVVNGKADAFVYD--APYNVVAVDKAGAGKLLFLDEPFTYEPLA 221

Query: 238 IMYRKDDPQLNKVVIDAFQVLAEDGEIERQYKRWFLRK 275
              +K D      + +    +  DG  +R + +WF  K
Sbjct: 222 FGLKKGDYDSINFINNFLHQIKHDGTYDRIHDKWFKNK 259