Pairwise Alignments

Query, 254 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 259 a.a., putative ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  166 bits (419), Expect = 6e-46
 Identities = 90/252 (35%), Positives = 144/252 (57%), Gaps = 3/252 (1%)

Query: 5   TGWRAL---LYKETLRFWKVGFQTVGAPVLTALLYLMVFGHVLEGRVTVYGTVGYTAFLV 61
           T W AL   +Y+E  RF ++  QT+  P +T +LY ++FG+++  ++   G   Y  ++V
Sbjct: 7   TNWVALNTIVYREVRRFLRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMQYIV 66

Query: 62  PGLVMMSVLQNAFANSSSSIIQSKIMGNLVFVLLTPLSHWGWFFAYVGSSIIRGLAVGLG 121
           PGL+MMSV+ N++ N  SS   SK   ++  ++++P+S       YV   ++RGLAVG+ 
Sbjct: 67  PGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILVGYVLGGVLRGLAVGVI 126

Query: 122 VFLVTMLFAVPDFVAPLWIIVFALLGAAMLGTLGLIAGLWAEKFDQMAVFQNFLIMPMTF 181
           V +++M F           +   LL A +   LG +  ++A  FD +++   F++ P+T+
Sbjct: 127 VTILSMFFTDLQVHHLGVTVAVVLLTATIFSLLGFVNAVFARNFDDISIIPTFVLTPLTY 186

Query: 182 LSGVFYSIGSLPPFWQKVSHLNPFFYMIDGFRYGFFGVSDASPWLSLGIVGTAWLVVSAI 241
           L GVFYSI  LPPFWQ VS  NP  +M++ FRYG  GVSD S   ++  +  A  V+  +
Sbjct: 187 LGGVFYSINLLPPFWQTVSLANPVLHMVNSFRYGILGVSDISIGTAITFMLVATAVLYVV 246

Query: 242 AVHLLRIGYKIR 253
            V LL  G  +R
Sbjct: 247 CVRLLVSGRGMR 258