Pairwise Alignments

Query, 254 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 256 a.a., ABC-type multidrug transport system, permease component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  169 bits (427), Expect = 7e-47
 Identities = 85/239 (35%), Positives = 141/239 (58%), Gaps = 5/239 (2%)

Query: 8   RALLYKETLRFWKVGFQTVGAPVLTALLYLMVFGHVLEGRVTVYGTVGYTAFLVPGLVMM 67
           +++  KE  RF ++  QT+  PV+T  LY ++FG+++  R+       Y  F+VPGL+MM
Sbjct: 10  KSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFSYMQFIVPGLIMM 69

Query: 68  SVLQNAFANSSSSIIQSKIMGNLVFVLLTPLSHWGWFFAYVGSSIIRGLAVGLGVFLVTM 127
           +V+ N++AN +SS   +K   N+  +L+ P+        +VG  + RGL VG+ V  +++
Sbjct: 70  AVITNSYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGLCVGILVTAISL 129

Query: 128 LFAVPDFVAPLWIIVFALLGAAMLGTLGLIAGLWAEKFDQMAVFQNFLIMPMTFLSGVFY 187
            F      + +++ +  +L A +    GL+  ++A+ FD +++   F++ P+T+L GVFY
Sbjct: 130 FFVPFQVHSWVFVALTLILTAILFSLAGLLNAVFAKTFDDISLIPTFVLTPLTYLGGVFY 189

Query: 188 SIGSLPPFWQKVSHLNPFFYMIDGFRYGFFGVSDASPWLSLGIVGTAWLVVSAIAVHLL 246
           S+  LPPFWQ +SHLNP  YMI GFRYGF G+ D     + G+     LV+   A +LL
Sbjct: 190 SLTLLPPFWQGLSHLNPIVYMISGFRYGFLGIHDVPLVTTFGV-----LVIFIAAFYLL 243