Pairwise Alignments

Query, 359 a.a., Type IV pilus biogenesis protein PilM from Variovorax sp. SCN45

Subject, 293 a.a., putative Type IV pili biogenesis protein PilM from Pseudomonas putida KT2440

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)

Query: 8   FRRQNAPLLGLDVSSSSVKLVELGREASGKLVLERCAI----EPLERGWITDGNVEKFDE 63
           F +    L+G++++  +V++++L +         RC +    + L +  + D   +    
Sbjct: 5   FGKDAGSLVGVEITPDAVRIMQLQQRN------RRCRVMGSAQELFQAPLADDWAQAPGV 58

Query: 64  VAEAVRRVIRKSGTRTRNVALALPPSAVITKKIILPGGMSEQELEIQVESEANQYIPFSL 123
           V  A++R  R+SG R R VALALP S VI K   LP   S  +LE Q+ ++A +  PF L
Sbjct: 59  VVAALQRAYRRSGLRQRRVALALPASQVICKLCHLPVEQSGAQLEAQLLADAERLFPFPL 118

Query: 124 DEVSLDFCVTGPSMTSAGDVEVLIAASRKEKVQDREGLAEAAGLKAMILDVESYASRLAT 183
           ++++LDF V G S    G  EV++AA R+  +   E + E AGL+   ++V++ A     
Sbjct: 119 EDLALDFQVMGASHDQPGCSEVMVAACRQSALASLEAVVEEAGLQLEAVEVDNIA----- 173

Query: 184 ARLIEQLPGKGVDAVVAL 201
             L   LP  G++    L
Sbjct: 174 --LCRMLPQGGLEGAALL 189